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Host relatedness and landscape connectivity shape pathogen spread in the puma, a large secretive carnivore.
Fountain-Jones NM, Kraberger S, Gagne RB, Trumbo DR, Salerno PE, Chris Funk W, Crooks K, Biek R, Alldredge M, Logan K, Baele G, Dellicour S, Ernest HB, VandeWoude S, Carver S, Craft ME. Fountain-Jones NM, et al. Among authors: baele g. Commun Biol. 2021 Jan 4;4(1):12. doi: 10.1038/s42003-020-01548-2. Commun Biol. 2021. PMID: 33398025 Free PMC article.
Recent advances in computational phylodynamics.
Baele G, Dellicour S, Suchard MA, Lemey P, Vrancken B. Baele G, et al. Curr Opin Virol. 2018 Aug;31:24-32. doi: 10.1016/j.coviro.2018.08.009. Epub 2018 Sep 22. Curr Opin Virol. 2018. PMID: 30248578 Review.
Incorporating heterogeneous sampling probabilities in continuous phylogeographic inference - Application to H5N1 spread in the Mekong region.
Dellicour S, Lemey P, Artois J, Lam TT, Fusaro A, Monne I, Cattoli G, Kuznetsov D, Xenarios I, Dauphin G, Kalpravidh W, Von Dobschuetz S, Claes F, Newman SH, Suchard MA, Baele G, Gilbert M. Dellicour S, et al. Among authors: baele g. Bioinformatics. 2020 Apr 1;36(7):2098-2104. doi: 10.1093/bioinformatics/btz882. Bioinformatics. 2020. PMID: 31790143 Free PMC article.
Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa.
Faria NR, Vidal N, Lourenco J, Raghwani J, Sigaloff KCE, Tatem AJ, van de Vijver DAM, Pineda-Peña AC, Rose R, Wallis CL, Ahuka-Mundeke S, Muyembe-Tamfum JJ, Muwonga J, Suchard MA, Rinke de Wit TF, Hamers RL, Ndembi N, Baele G, Peeters M, Pybus OG, Lemey P, Dellicour S. Faria NR, et al. Among authors: baele g. PLoS Pathog. 2019 Dec 6;15(12):e1007976. doi: 10.1371/journal.ppat.1007976. eCollection 2019 Dec. PLoS Pathog. 2019. PMID: 31809523 Free PMC article.
Genomic Epidemiology, Evolution, and Transmission Dynamics of Porcine Deltacoronavirus.
He WT, Ji X, He W, Dellicour S, Wang S, Li G, Zhang L, Gilbert M, Zhu H, Xing G, Veit M, Huang Z, Han GZ, Huang Y, Suchard MA, Baele G, Lemey P, Su S. He WT, et al. Among authors: baele g. Mol Biol Evol. 2020 Sep 1;37(9):2641-2654. doi: 10.1093/molbev/msaa117. Mol Biol Evol. 2020. PMID: 32407507 Free PMC article.
225 results