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A high prevalence of blaOXA-48 in Klebsiella (Raoultella) ornithinolytica and related species in hospital wastewater in South West England.
Gibbon MJ, Couto N, David S, Barden R, Standerwick R, Jagadeesan K, Birkwood H, Dulyayangkul P, Avison MB, Kannan A, Kibbey D, Craft T, Habib S, Thorpe HA, Corander J, Kasprzyk-Hordern B, Feil EJ. Gibbon MJ, et al. Among authors: david s. Microb Genom. 2021 Mar;7(3):mgen000509. doi: 10.1099/mgen.0.000509. Epub 2021 Jan 8. Microb Genom. 2021. PMID: 33416467 Free PMC article.
Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread.
David S, Reuter S, Harris SR, Glasner C, Feltwell T, Argimon S, Abudahab K, Goater R, Giani T, Errico G, Aspbury M, Sjunnebo S; EuSCAPE Working Group; ESGEM Study Group; Feil EJ, Rossolini GM, Aanensen DM, Grundmann H. David S, et al. Nat Microbiol. 2019 Nov;4(11):1919-1929. doi: 10.1038/s41564-019-0492-8. Epub 2019 Jul 29. Nat Microbiol. 2019. PMID: 31358985 Free PMC article.
Integrated chromosomal and plasmid sequence analyses reveal diverse modes of carbapenemase gene spread among Klebsiella pneumoniae.
David S, Cohen V, Reuter S, Sheppard AE, Giani T, Parkhill J; European Survey of Carbapenemase-Producing Enterobacteriaceae (EuSCAPE) Working Group; ESCMID Study Group for Epidemiological Markers (ESGEM); Rossolini GM, Feil EJ, Grundmann H, Aanensen DM. David S, et al. Proc Natl Acad Sci U S A. 2020 Oct 6;117(40):25043-25054. doi: 10.1073/pnas.2003407117. Epub 2020 Sep 23. Proc Natl Acad Sci U S A. 2020. PMID: 32968015 Free PMC article.
High-resolution sweep metagenomics using fast probabilistic inference.
Mäklin T, Kallonen T, David S, Boinett CJ, Pascoe B, Méric G, Aanensen DM, Feil EJ, Baker S, Parkhill J, Sheppard SK, Corander J, Honkela A. Mäklin T, et al. Among authors: david s. Wellcome Open Res. 2021 Oct 8;5:14. doi: 10.12688/wellcomeopenres.15639.2. eCollection 2020. Wellcome Open Res. 2021. PMID: 34746439 Free PMC article.
High-Resolution Genomic Profiling of Carbapenem-Resistant Klebsiella pneumoniae Isolates: A Multicentric Retrospective Indian Study.
Nagaraj G, Shamanna V, Govindan V, Rose S, Sravani D, Akshata KP, Shincy MR, Venkatesha VT, Abrudan M, Argimón S, Kekre M, Underwood A, Aanensen DM, Ravikumar KL; NIHR Global Health Research Unit on Genomic Surveillance of Antimicrobial Resistance. Nagaraj G, et al. Clin Infect Dis. 2021 Dec 1;73(Suppl_4):S300-S307. doi: 10.1093/cid/ciab767. Clin Infect Dis. 2021. PMID: 34850832 Free PMC article.
Genome Sequencing Identifies Previously Unrecognized Klebsiella pneumoniae Outbreaks in Neonatal Intensive Care Units in the Philippines.
Carlos CC, Masim MAL, Lagrada ML, Gayeta JM, Macaranas PKV, Sia SB, Facun MAM, Palarca JFC, Olorosa AM, Cueno GAC, Abrudan M, Abudahab K, Argimón S, Kekre M, Underwood A, Stelling J, Aanensen DM; NIHR Global Health Research Unit on Genomic Surveillance of Antimicrobial Resistance. Carlos CC, et al. Clin Infect Dis. 2021 Dec 1;73(Suppl_4):S316-S324. doi: 10.1093/cid/ciab776. Clin Infect Dis. 2021. PMID: 34850834 Free PMC article.
Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch.
Argimón S, David S, Underwood A, Abrudan M, Wheeler NE, Kekre M, Abudahab K, Yeats CA, Goater R, Taylor B, Harste H, Muddyman D, Feil EJ, Brisse S, Holt K, Donado-Godoy P, Ravikumar KL, Okeke IN, Carlos C, Aanensen DM; NIHR Global Health Research Unit on Genomic Surveillance of Antimicrobial Resistance. Argimón S, et al. Among authors: david s. Clin Infect Dis. 2021 Dec 1;73(Suppl_4):S325-S335. doi: 10.1093/cid/ciab784. Clin Infect Dis. 2021. PMID: 34850838 Free PMC article.
A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings.
Thorpe HA, Booton R, Kallonen T, Gibbon MJ, Couto N, Passet V, López-Fernández S, Rodrigues C, Matthews L, Mitchell S, Reeve R, David S, Merla C, Corbella M, Ferrari C, Comandatore F, Marone P, Brisse S, Sassera D, Corander J, Feil EJ. Thorpe HA, et al. Among authors: david s. Nat Microbiol. 2022 Dec;7(12):2054-2067. doi: 10.1038/s41564-022-01263-0. Epub 2022 Nov 21. Nat Microbiol. 2022. PMID: 36411354 Free PMC article.
2,192 results