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Page 1
The dynamics of hematopoiesis over the human lifespan.
Li H, Côté P, Kuoch M, Ezike J, Frenis K, Afanassiev A, Greenstreet L, Tanaka-Yano M, Tarantino G, Zhang S, Whangbo J, Butty VL, Moiso E, Falchetti M, Lu K, Connelly GG, Morris V, Wang D, Chen AF, Bianchi G, Daley GQ, Garg S, Liu D, Chou ST, Regev A, Lummertz da Rocha E, Schiebinger G, Rowe RG. Li H, et al. Among authors: afanassiev a. Nat Methods. 2024 Dec 5. doi: 10.1038/s41592-024-02495-0. Online ahead of print. Nat Methods. 2024. PMID: 39639169
Single-cell transcriptomics reveals evolutionary reconfiguration of embryonic cell fate specification in the sea urchin Heliocidaris erythrogramma.
Massri AJ, Berrio A, Afanassiev A, Greenstreet L, Pipho K, Byrne M, Schiebinger G, McClay DR, Wray GA. Massri AJ, et al. Among authors: afanassiev a. bioRxiv [Preprint]. 2024 May 1:2024.04.30.591752. doi: 10.1101/2024.04.30.591752. bioRxiv. 2024. Update in: Genome Biol Evol. 2024 Nov 26:evae258. doi: 10.1093/gbe/evae258 PMID: 38746376 Free PMC article. Updated. Preprint.
Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root.
Nolan TM, Vukašinović N, Hsu CW, Zhang J, Vanhoutte I, Shahan R, Taylor IW, Greenstreet L, Heitz M, Afanassiev A, Wang P, Szekely P, Brosnan A, Yin Y, Schiebinger G, Ohler U, Russinova E, Benfey PN. Nolan TM, et al. Among authors: afanassiev a. Science. 2023 Mar 31;379(6639):eadf4721. doi: 10.1126/science.adf4721. Epub 2023 Mar 31. Science. 2023. PMID: 36996230 Free PMC article.
Optimal transport analysis reveals trajectories in steady-state systems.
Zhang S, Afanassiev A, Greenstreet L, Matsumoto T, Schiebinger G. Zhang S, et al. Among authors: afanassiev a. PLoS Comput Biol. 2021 Dec 3;17(12):e1009466. doi: 10.1371/journal.pcbi.1009466. eCollection 2021 Dec. PLoS Comput Biol. 2021. PMID: 34860824 Free PMC article.