Yang P - Search Results

1

Clonal evolution in liver cancer at single-cell and single-variant resolution.

Su X, Zhao L, Shi Y, Zhang R, Long Q, Bai S, Luo Q, Lin Y, Zou X, Ghazanfar S, Tao K, Yang G, Wang L, He KY, Cui X, He J, Wu JX, Han B, Yan B, Deng B, Wang N, Li X, Yang P, Hou S, Sun J, Yang JYH, Chen J, Han ZG. Su X, et al. Among authors: yang jyh, yang p, yang g. J Hematol Oncol. 2021 Feb 2;14(1):22. doi: 10.1186/s13045-021-01036-y. J Hematol Oncol. 2021. PMID: 33531041 Free PMC article.

2

KinasePA: Phosphoproteomics data annotation using hypothesis driven kinase perturbation analysis.

Yang P, Patrick E, Humphrey SJ, Ghazanfar S, James DE, Jothi R, Yang JY. Yang P, et al. Among authors: yang jy. Proteomics. 2016 Jul;16(13):1868-71. doi: 10.1002/pmic.201600068. Epub 2016 May 27. Proteomics. 2016. PMID: 27145998 Free PMC article.

3

Impact of similarity metrics on single-cell RNA-seq data clustering.

Kim T, Chen IR, Lin Y, Wang AY, Yang JYH, Yang P. Kim T, et al. Among authors: yang jyh, yang p. Brief Bioinform. 2019 Nov 27;20(6):2316-2326. doi: 10.1093/bib/bby076. Brief Bioinform. 2019. PMID: 30137247

4

scMerge leverages factor analysis, stable expression, and pseudoreplication to merge multiple single-cell RNA-seq datasets.

Lin Y, Ghazanfar S, Wang KYX, Gagnon-Bartsch JA, Lo KK, Su X, Han ZG, Ormerod JT, Speed TP, Yang P, Yang JYH. Lin Y, et al. Among authors: yang jyh, yang p. Proc Natl Acad Sci U S A. 2019 May 14;116(20):9775-9784. doi: 10.1073/pnas.1820006116. Epub 2019 Apr 26. Proc Natl Acad Sci U S A. 2019. PMID: 31028141 Free PMC article.

5

Evaluating stably expressed genes in single cells.

Lin Y, Ghazanfar S, Strbenac D, Wang A, Patrick E, Lin DM, Speed T, Yang JYH, Yang P. Lin Y, et al. Among authors: yang jyh, yang p. Gigascience. 2019 Sep 1;8(9):giz106. doi: 10.1093/gigascience/giz106. Gigascience. 2019. PMID: 31531674 Free PMC article.

6

Autoencoder-based cluster ensembles for single-cell RNA-seq data analysis.

Geddes TA, Kim T, Nan L, Burchfield JG, Yang JYH, Tao D, Yang P. Geddes TA, et al. Among authors: yang jyh, yang p. BMC Bioinformatics. 2019 Dec 24;20(Suppl 19):660. doi: 10.1186/s12859-019-3179-5. BMC Bioinformatics. 2019. PMID: 31870278 Free PMC article.

7

scDC: single cell differential composition analysis.

Cao Y, Lin Y, Ormerod JT, Yang P, Yang JYH, Lo KK. Cao Y, et al. Among authors: yang jyh, yang p. BMC Bioinformatics. 2019 Dec 24;20(Suppl 19):721. doi: 10.1186/s12859-019-3211-9. BMC Bioinformatics. 2019. PMID: 31870280 Free PMC article.

8

CiteFuse enables multi-modal analysis of CITE-seq data.

Kim HJ, Lin Y, Geddes TA, Yang JYH, Yang P. Kim HJ, et al. Among authors: yang jyh, yang p. Bioinformatics. 2020 Aug 15;36(14):4137-4143. doi: 10.1093/bioinformatics/btaa282. Bioinformatics. 2020. PMID: 32353146

9

scClassify: sample size estimation and multiscale classification of cells using single and multiple reference.

Lin Y, Cao Y, Kim HJ, Salim A, Speed TP, Lin DM, Yang P, Yang JYH. Lin Y, et al. Among authors: yang jyh, yang p. Mol Syst Biol. 2020 Jun;16(6):e9389. doi: 10.15252/msb.20199389. Mol Syst Biol. 2020. PMID: 32567229 Free PMC article.

10

Benchmarking clustering algorithms on estimating the number of cell types from single-cell RNA-sequencing data.

Yu L, Cao Y, Yang JYH, Yang P. Yu L, et al. Among authors: yang jyh, yang p. Genome Biol. 2022 Feb 8;23(1):49. doi: 10.1186/s13059-022-02622-0. Genome Biol. 2022. PMID: 35135612 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

16,152 results

Search Page

Filters