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Emergence of Omicron FN.1 a descendent of BQ.1.1 in Botswana.
Choga WT, Gustani-Buss E, Tegally H, Maruapula D, Yu X, Moir M, Zuze BJL, James SE, Ndlovu NS, Seru K, Motshosi P, Blenkinsop A, Gobe I, Baxter C, Manasa J, Lockman S, Shapiro R, Makhema J, Wilkinson E, Blackard JT, Lemey P, Lessells RJ, Martin DP, de Oliveira T, Gaseitsiwe S, Moyo S. Choga WT, et al. Among authors: tegally h. Virus Evol. 2024 Nov 22;10(1):veae095. doi: 10.1093/ve/veae095. eCollection 2024. Virus Evol. 2024. PMID: 39720788 Free PMC article.
Alignment-Free Viral Sequence Classification at Scale.
van Zyl DJ, Dunaiski M, Tegally H, Baxter C; INFORM Africa research study group; de Oliveira T, Xavier JS. van Zyl DJ, et al. Among authors: tegally h. bioRxiv [Preprint]. 2024 Dec 11:2024.12.10.627186. doi: 10.1101/2024.12.10.627186. bioRxiv. 2024. PMID: 39713356 Free PMC article. Preprint.
"The COVID-19 pandemic in BRICS: Milestones, interventions, and molecular epidemiology".
van Wyk S, Moir M, Banerjee A, Bazykin GA, Biswas NK, Sitharam N, Das S, Ma W, Maitra A, Mazumder A, Karim WA, Lamarca AP, Li M, Nabieva E, Tegally H, San JE, Vasconcelos ATR, Xavier JS, Wilkinson E, de Oliveira T. van Wyk S, et al. Among authors: tegally h. PLOS Glob Public Health. 2024 Dec 20;4(12):e0003023. doi: 10.1371/journal.pgph.0003023. eCollection 2024. PLOS Glob Public Health. 2024. PMID: 39705269 Free PMC article.
Dengue virus importation risks in Africa: a modelling study.
Poongavanan J, Lourenço J, Tsui JL, Colizza V, Ramphal Y, Baxter C, Kraemer MUG, Dunaiski M, de Oliveira T, Tegally H. Poongavanan J, et al. Among authors: tegally h. Lancet Planet Health. 2024 Dec;8(12):e1043-e1054. doi: 10.1016/S2542-5196(24)00272-9. Lancet Planet Health. 2024. PMID: 39674194 Free PMC article.
Dynamics and ecology of a multi-stage expansion of Oropouche virus in Brazil.
Tegally H, Dellicour S, Poongavanan J, Mavian C, Dor G, Fonseca V, Tagliamonte MS, Dunaiski M, Moir M, Wilkinson E, de Albuquerque CFC, Frutuoso LCV; CLIMADE Consortium; Holmes EC, Baxter C, Lessells R, Kraemer MUG, Lourenço J, Alcantara LCJ, de Oliveira T, Giovanetti M. Tegally H, et al. medRxiv [Preprint]. 2024 Oct 30:2024.10.29.24316328. doi: 10.1101/2024.10.29.24316328. medRxiv. 2024. PMID: 39574858 Free PMC article. Preprint.
Assessing Dengue Virus Importation Risks in Africa: A Climate and Travel-Based Model.
Poongavanan J, Lourenço J, Tsui JL, Colizza V, Ramphal Y, Baxter C, Kraemer MUG, Dunaiski M, de Oliveira T, Tegally H. Poongavanan J, et al. Among authors: tegally h. medRxiv [Preprint]. 2024 Oct 29:2024.05.07.24306997. doi: 10.1101/2024.05.07.24306997. medRxiv. 2024. Update in: Lancet Planet Health. 2024 Dec;8(12):e1043-e1054. doi: 10.1016/S2542-5196(24)00272-9 PMID: 39574849 Free PMC article. Updated. Preprint.
Integrated analyses of the transmission history of SARS-CoV-2 and its association with molecular evolution of the virus underlining the pandemic outbreaks in Italy, 2019-2023.
Cella E, Fonseca V, Branda F, Tosta S, Moreno K, Schuab G, Ali S, Slavov SN, Scarpa F, Santos LA, Kashima S, Wilkinson E, Tegally H, Mavian C, Borsetti A, Caccuri F, Salemi M, de Oliveira T, Azarian T, de Filippis AMB, Alcantara LCJ, Ceccarelli G, Caruso A, Colizzi V, Marcello A, Lourenço J, Ciccozzi M, Giovanetti M. Cella E, et al. Among authors: tegally h. Int J Infect Dis. 2024 Dec;149:107262. doi: 10.1016/j.ijid.2024.107262. Epub 2024 Oct 9. Int J Infect Dis. 2024. PMID: 39389289 Free article.
A new lineage nomenclature to aid genomic surveillance of dengue virus.
Hill V, Cleemput S, Pereira JS, Gifford RJ, Fonseca V, Tegally H, Brito AF, Ribeiro G, de Souza VC, Brcko IC, Ribeiro IS, De Lima ITT, Slavov SN, Sampaio SC, Elias MC, Tran VT, Kien DTH, Huynh T, Yacoub S, Dieng I, Salvato R, Wallau GL, Gregianini TS, Godinho FMS, Vogels CBF, Breban MI, Leguia M, Jagtap S, Roy R, Hapuarachchi C, Mwanyika G, Giovanetti M, Alcantara LCJ, Faria NR, Carrington CVF, Hanley KA, Holmes EC, Dumon W, Lima ARJ, Oliveira T, Grubaugh ND. Hill V, et al. Among authors: tegally h. PLoS Biol. 2024 Sep 16;22(9):e3002834. doi: 10.1371/journal.pbio.3002834. eCollection 2024 Sep. PLoS Biol. 2024. PMID: 39283942 Free PMC article.
Understanding the Transmission Dynamics of the Chikungunya Virus in Africa.
Ramphal Y, Tegally H, San JE, Reichmuth ML, Hofstra M, Wilkinson E, Baxter C, Climade Consortium, de Oliveira T, Moir M. Ramphal Y, et al. Among authors: tegally h. Pathogens. 2024 Jul 22;13(7):605. doi: 10.3390/pathogens13070605. Pathogens. 2024. PMID: 39057831 Free PMC article. Review.
91 results