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Chromosome-length genome assembly and structural variations of the primal Basenji dog (Canis lupus familiaris) genome.
Edwards RJ, Field MA, Ferguson JM, Dudchenko O, Keilwagen J, Rosen BD, Johnson GS, Rice ES, Hillier D, Hammond JM, Towarnicki SG, Omer A, Khan R, Skvortsova K, Bogdanovic O, Zammit RA, Aiden EL, Warren WC, Ballard JWO. Edwards RJ, et al. Among authors: keilwagen j. BMC Genomics. 2021 Mar 16;22(1):188. doi: 10.1186/s12864-021-07493-6. BMC Genomics. 2021. PMID: 33726677 Free PMC article.
Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C.
Field MA, Rosen BD, Dudchenko O, Chan EKF, Minoche AE, Edwards RJ, Barton K, Lyons RJ, Tuipulotu DE, Hayes VM, D Omer A, Colaric Z, Keilwagen J, Skvortsova K, Bogdanovic O, Smith MA, Aiden EL, Smith TPL, Zammit RA, Ballard JWO. Field MA, et al. Among authors: keilwagen j. Gigascience. 2020 Apr 1;9(4):giaa027. doi: 10.1093/gigascience/giaa027. Gigascience. 2020. PMID: 32236524 Free PMC article.
The draft chromosome-level genome assembly of tetraploid ground cherry (Prunus fruticosa Pall.) from long reads.
Wöhner TW, Emeriewen OF, Wittenberg AHJ, Schneiders H, Vrijenhoek I, Halász J, Hrotkó K, Hoff KJ, Gabriel L, Lempe J, Keilwagen J, Berner T, Schuster M, Peil A, Wünsche J, Kropop S, Flachowsky H. Wöhner TW, et al. Among authors: keilwagen j. Genomics. 2021 Nov;113(6):4173-4183. doi: 10.1016/j.ygeno.2021.11.002. Epub 2021 Nov 11. Genomics. 2021. PMID: 34774678 Free article.
The Australian dingo is an early offshoot of modern breed dogs.
Field MA, Yadav S, Dudchenko O, Esvaran M, Rosen BD, Skvortsova K, Edwards RJ, Keilwagen J, Cochran BJ, Manandhar B, Bustamante S, Rasmussen JA, Melvin RG, Chernoff B, Omer A, Colaric Z, Chan EKF, Minoche AE, Smith TPL, Gilbert MTP, Bogdanovic O, Zammit RA, Thomas T, Aiden EL, Ballard JWO. Field MA, et al. Among authors: keilwagen j. Sci Adv. 2022 Apr 22;8(16):eabm5944. doi: 10.1126/sciadv.abm5944. Epub 2022 Apr 22. Sci Adv. 2022. PMID: 35452284 Free PMC article.
The Australasian dingo archetype: De novo chromosome-length genome assembly, DNA methylome, and cranial morphology.
Ballard JWO, Field MA, Edwards RJ, Wilson LAB, Koungoulos LG, Rosen BD, Chernoff B, Dudchenko O, Omer A, Keilwagen J, Skvortsova K, Bogdanovic O, Chan E, Zammit R, Hayes V, Aiden EL. Ballard JWO, et al. Among authors: keilwagen j. bioRxiv [Preprint]. 2023 Jan 27:2023.01.26.525801. doi: 10.1101/2023.01.26.525801. bioRxiv. 2023. Update in: Gigascience. 2023 Mar 20;12:giad018. doi: 10.1093/gigascience/giad018 PMID: 36747621 Free PMC article. Updated. Preprint.
The Australasian dingo archetype: de novo chromosome-length genome assembly, DNA methylome, and cranial morphology.
Ballard JWO, Field MA, Edwards RJ, Wilson LAB, Koungoulos LG, Rosen BD, Chernoff B, Dudchenko O, Omer A, Keilwagen J, Skvortsova K, Bogdanovic O, Chan E, Zammit R, Hayes V, Aiden EL. Ballard JWO, et al. Among authors: keilwagen j. Gigascience. 2023 Mar 20;12:giad018. doi: 10.1093/gigascience/giad018. Epub 2023 Mar 28. Gigascience. 2023. PMID: 36994871 Free PMC article.
Association genetics studies on frost tolerance in wheat (Triticum aestivum L.) reveal new highly conserved amino acid substitutions in CBF-A3, CBF-A15, VRN3 and PPD1 genes.
Babben S, Schliephake E, Janitza P, Berner T, Keilwagen J, Koch M, Arana-Ceballos FA, Templer SE, Chesnokov Y, Pshenichnikova T, Schondelmaier J, Börner A, Pillen K, Ordon F, Perovic D. Babben S, et al. Among authors: keilwagen j. BMC Genomics. 2018 May 29;19(1):409. doi: 10.1186/s12864-018-4795-6. BMC Genomics. 2018. PMID: 29843596 Free PMC article.
65 results