Remy É - Search Results

1

MultiVERSE: a multiplex and multiplex-heterogeneous network embedding approach.

Pio-Lopez L, Valdeolivas A, Tichit L, Remy É, Baudot A. Pio-Lopez L, et al. Among authors: remy e. Sci Rep. 2021 Apr 22;11(1):8794. doi: 10.1038/s41598-021-87987-1. Sci Rep. 2021. PMID: 33888761 Free PMC article.

2

Dynamical modeling and analysis of large cellular regulatory networks.

Bérenguier D, Chaouiya C, Monteiro PT, Naldi A, Remy E, Thieffry D, Tichit L. Bérenguier D, et al. Among authors: remy e. Chaos. 2013 Jun;23(2):025114. doi: 10.1063/1.4809783. Chaos. 2013. PMID: 23822512

3

Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling.

Flobak Å, Baudot A, Remy E, Thommesen L, Thieffry D, Kuiper M, Lægreid A. Flobak Å, et al. Among authors: remy e. PLoS Comput Biol. 2015 Aug 28;11(8):e1004426. doi: 10.1371/journal.pcbi.1004426. eCollection 2015 Aug. PLoS Comput Biol. 2015. PMID: 26317215 Free PMC article.

4

Random walk with restart on multiplex and heterogeneous biological networks.

Valdeolivas A, Tichit L, Navarro C, Perrin S, Odelin G, Levy N, Cau P, Remy E, Baudot A. Valdeolivas A, et al. Among authors: remy e. Bioinformatics. 2019 Feb 1;35(3):497-505. doi: 10.1093/bioinformatics/bty637. Bioinformatics. 2019. PMID: 30020411

5

Integrative proteomic and phosphoproteomic profiling of prostate cell lines.

Katsogiannou M, Boyer JB, Valdeolivas A, Remy E, Calzone L, Audebert S, Rocchi P, Camoin L, Baudot A. Katsogiannou M, et al. Among authors: remy e. PLoS One. 2019 Nov 1;14(11):e0224148. doi: 10.1371/journal.pone.0224148. eCollection 2019. PLoS One. 2019. PMID: 31675377 Free PMC article.

6

Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer.

Cantini L, Zakeri P, Hernandez C, Naldi A, Thieffry D, Remy E, Baudot A. Cantini L, et al. Among authors: remy e. Nat Commun. 2021 Jan 5;12(1):124. doi: 10.1038/s41467-020-20430-7. Nat Commun. 2021. PMID: 33402734 Free PMC article.

7

Analysis of a logical regulatory network reveals how Fe-S cluster biogenesis is controlled in the face of stress.

Hammami F, Tichit L, Py B, Barras F, Mandin P, Remy E. Hammami F, et al. Among authors: remy e. Microlife. 2023 Mar 2;4:uqad003. doi: 10.1093/femsml/uqad003. eCollection 2023. Microlife. 2023. PMID: 37223744 Free PMC article.

8

Estimating Attractor Reachability in Asynchronous Logical Models.

Mendes ND, Henriques R, Remy E, Carneiro J, Monteiro PT, Chaouiya C. Mendes ND, et al. Among authors: remy e. Front Physiol. 2018 Sep 7;9:1161. doi: 10.3389/fphys.2018.01161. eCollection 2018. Front Physiol. 2018. PMID: 30245634 Free PMC article.

9

Formalizing and enriching phenotype signatures using Boolean networks.

Wery M, Dameron O, Nicolas J, Remy E, Siegel A. Wery M, et al. Among authors: remy e. J Theor Biol. 2019 Apr 21;467:66-79. doi: 10.1016/j.jtbi.2019.01.015. Epub 2019 Feb 6. J Theor Biol. 2019. PMID: 30738049

10

A description of dynamical graphs associated to elementary regulatory circuits.

Remy E, Mossé B, Chaouiya C, Thieffry D. Remy E, et al. Bioinformatics. 2003 Oct;19 Suppl 2:ii172-8. doi: 10.1093/bioinformatics/btg1075. Bioinformatics. 2003. PMID: 14534187

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