Lan X - Search Results

1

Quasispecies of SARS-CoV-2 revealed by single nucleotide polymorphisms (SNPs) analysis.

Gao R, Zu W, Liu Y, Li J, Li Z, Wen Y, Wang H, Yuan J, Cheng L, Zhang S, Zhang Y, Zhang S, Liu W, Lan X, Liu L, Li F, Zhang Z. Gao R, et al. Among authors: lan x. Virulence. 2021 Dec;12(1):1209-1226. doi: 10.1080/21505594.2021.1911477. Virulence. 2021. PMID: 34030593 Free PMC article.

2

Genome-wide evolution analysis reveals low CpG contents of fast-evolving genes and identifies antiviral microRNAs.

Zu W, Zhang H, Lan X, Tan X. Zu W, et al. Among authors: lan x. J Genet Genomics. 2020 Jan 20;47(1):49-60. doi: 10.1016/j.jgg.2019.12.001. Epub 2019 Dec 23. J Genet Genomics. 2020. PMID: 32081608

3

Functional and genetic analysis of viral receptor ACE2 orthologs reveals a broad potential host range of SARS-CoV-2.

Liu Y, Hu G, Wang Y, Ren W, Zhao X, Ji F, Zhu Y, Feng F, Gong M, Ju X, Zhu Y, Cai X, Lan J, Guo J, Xie M, Dong L, Zhu Z, Na J, Wu J, Lan X, Xie Y, Wang X, Yuan Z, Zhang R, Ding Q. Liu Y, et al. Among authors: lan j, lan x. Proc Natl Acad Sci U S A. 2021 Mar 23;118(12):e2025373118. doi: 10.1073/pnas.2025373118. Proc Natl Acad Sci U S A. 2021. PMID: 33658332 Free PMC article.

4

Prevalence of phase variable epigenetic invertons among host-associated bacteria.

Huang X, Wang J, Li J, Liu Y, Liu X, Li Z, Kurniyati K, Deng Y, Wang G, Ralph JD, De Ste Croix M, Escobar-Gonzalez S, Roberts RJ, Veening JW, Lan X, Oggioni MR, Li C, Zhang JR. Huang X, et al. Among authors: lan x. Nucleic Acids Res. 2020 Nov 18;48(20):11468-11485. doi: 10.1093/nar/gkaa907. Nucleic Acids Res. 2020. PMID: 33119758 Free PMC article.

5

Chrom-Lasso: a lasso regression-based model to detect functional interactions using Hi-C data.

Lu J, Wang X, Sun K, Lan X. Lu J, et al. Among authors: lan x. Brief Bioinform. 2021 Nov 5;22(6):bbab181. doi: 10.1093/bib/bbab181. Brief Bioinform. 2021. PMID: 34013331 Free PMC article.

6

The coSIR model predicts effective strategies to limit the spread of SARS-CoV-2 variants with low severity and high transmissibility.

Xu L, Zhang H, Xu H, Yang H, Zhang L, Zhang W, Gu F, Lan X. Xu L, et al. Among authors: lan x. Nonlinear Dyn. 2021;105(3):2757-2773. doi: 10.1007/s11071-021-06705-8. Epub 2021 Jul 23. Nonlinear Dyn. 2021. PMID: 34334951 Free PMC article.

7

Mutant Kras co-opts a proto-oncogenic enhancer network in inflammation-induced metaplastic progenitor cells to initiate pancreatic cancer.

Li Y, He Y, Peng J, Su Z, Li Z, Zhang B, Ma J, Zhuo M, Zou D, Liu X, Liu X, Wang W, Huang D, Xu M, Wang J, Deng H, Xue J, Xie W, Lan X, Chen M, Zhao Y, Wu W, David CJ. Li Y, et al. Among authors: lan x. Nat Cancer. 2021 Jan;2(1):49-65. doi: 10.1038/s43018-020-00134-z. Epub 2020 Nov 2. Nat Cancer. 2021. PMID: 35121887

8

Identification of virus epitopes and reactive T-cell receptors from memory T cells without peptide synthesis.

Wang L, Xu R, Huang D, Peng P, Sun K, Hu J, Liu BZ, Fang L, Zhang L, Sun X, Gu F, Tang N, Huang AL, Lin X, Lan X. Wang L, et al. Among authors: lan x. Commun Biol. 2024 Nov 4;7(1):1432. doi: 10.1038/s42003-024-07048-x. Commun Biol. 2024. PMID: 39496850 Free PMC article.

9

COMSE: analysis of single-cell RNA-seq data using community detection-based feature selection.

Luo Q, Chen Y, Lan X. Luo Q, et al. Among authors: lan x. BMC Biol. 2024 Aug 7;22(1):167. doi: 10.1186/s12915-024-01963-5. BMC Biol. 2024. PMID: 39113021 Free PMC article.

10

SIGNET: single-cell RNA-seq-based gene regulatory network prediction using multiple-layer perceptron bagging.

Luo Q, Yu Y, Lan X. Luo Q, et al. Among authors: lan x. Brief Bioinform. 2022 Jan 17;23(1):bbab547. doi: 10.1093/bib/bbab547. Brief Bioinform. 2022. PMID: 34962260 Free PMC article.

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