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A chromosomal assembly of the soybean cyst nematode genome.
Masonbrink RE, Maier TR, Hudson M, Severin A, Baum T. Masonbrink RE, et al. Mol Ecol Resour. 2021 Oct;21(7):2407-2422. doi: 10.1111/1755-0998.13432. Epub 2021 Jun 10. Mol Ecol Resour. 2021. PMID: 34036752
The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes.
Masonbrink R, Maier TR, Muppirala U, Seetharam AS, Lord E, Juvale PS, Schmutz J, Johnson NT, Korkin D, Mitchum MG, Mimee B, den Akker SE, Hudson M, Severin AJ, Baum TJ. Masonbrink R, et al. BMC Genomics. 2019 Feb 7;20(1):119. doi: 10.1186/s12864-019-5485-8. BMC Genomics. 2019. PMID: 30732586 Free PMC article.
Shared data science infrastructure for genomics data.
Bagheri H, Muppirala U, Masonbrink RE, Severin AJ, Rajan H. Bagheri H, et al. Among authors: masonbrink re. BMC Bioinformatics. 2019 Aug 22;20(1):436. doi: 10.1186/s12859-019-2967-2. BMC Bioinformatics. 2019. PMID: 31438850 Free PMC article.
A pseudomolecule assembly of the Rocky Mountain elk genome.
Masonbrink RE, Alt D, Bayles DO, Boggiatto P, Edwards W, Tatum F, Williams J, Wilson-Welder J, Zimin A, Severin A, Olsen S. Masonbrink RE, et al. PLoS One. 2021 Apr 28;16(4):e0249899. doi: 10.1371/journal.pone.0249899. eCollection 2021. PLoS One. 2021. PMID: 33909645 Free PMC article.
The genome and lifestage-specific transcriptomes of a plant-parasitic nematode and its host reveal susceptibility genes involved in trans-kingdom synthesis of vitamin B5.
Siddique S, Radakovic ZS, Hiltl C, Pellegrin C, Baum TJ, Beasley H, Bent AF, Chitambo O, Chopra D, Danchin EGJ, Grenier E, Habash SS, Hasan MS, Helder J, Hewezi T, Holbein J, Holterman M, Janakowski S, Koutsovoulos GD, Kranse OP, Lozano-Torres JL, Maier TR, Masonbrink RE, Mendy B, Riemer E, Sobczak M, Sonawala U, Sterken MG, Thorpe P, van Steenbrugge JJM, Zahid N, Grundler F, Eves-van den Akker S. Siddique S, et al. Among authors: masonbrink re. Nat Commun. 2022 Oct 19;13(1):6190. doi: 10.1038/s41467-022-33769-w. Nat Commun. 2022. PMID: 36261416 Free PMC article.
29 results