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A chromosome-scale assembly of the bilberry genome identifies a complex locus controlling berry anthocyanin composition.
Wu C, Deng C, Hilario E, Albert NW, Lafferty D, Grierson ERP, Plunkett BJ, Elborough C, Saei A, Günther CS, Ireland H, Yocca A, Edger PP, Jaakola L, Karppinen K, Grande A, Kylli R, Lehtola VP, Allan AC, Espley RV, Chagné D. Wu C, et al. Among authors: yocca a. Mol Ecol Resour. 2022 Jan;22(1):345-360. doi: 10.1111/1755-0998.13467. Epub 2021 Aug 4. Mol Ecol Resour. 2022. PMID: 34260155
Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry.
Colle M, Leisner CP, Wai CM, Ou S, Bird KA, Wang J, Wisecaver JH, Yocca AE, Alger EI, Tang H, Xiong Z, Callow P, Ben-Zvi G, Brodt A, Baruch K, Swale T, Shiue L, Song GQ, Childs KL, Schilmiller A, Vorsa N, Buell CR, VanBuren R, Jiang N, Edger PP. Colle M, et al. Among authors: yocca ae. Gigascience. 2019 Mar 1;8(3):giz012. doi: 10.1093/gigascience/giz012. Gigascience. 2019. PMID: 30715294 Free PMC article.
Origin and evolution of the octoploid strawberry genome.
Edger PP, Poorten TJ, VanBuren R, Hardigan MA, Colle M, McKain MR, Smith RD, Teresi SJ, Nelson ADL, Wai CM, Alger EI, Bird KA, Yocca AE, Pumplin N, Ou S, Ben-Zvi G, Brodt A, Baruch K, Swale T, Shiue L, Acharya CB, Cole GS, Mower JP, Childs KL, Jiang N, Lyons E, Freeling M, Puzey JR, Knapp SJ. Edger PP, et al. Among authors: yocca ae. Nat Genet. 2019 Mar;51(3):541-547. doi: 10.1038/s41588-019-0356-4. Epub 2019 Feb 25. Nat Genet. 2019. PMID: 30804557 Free PMC article.
Disease Resistance Genetics and Genomics in Octoploid Strawberry.
Barbey CR, Lee S, Verma S, Bird KA, Yocca AE, Edger PP, Knapp SJ, Whitaker VM, Folta KM. Barbey CR, et al. Among authors: yocca ae. G3 (Bethesda). 2019 Oct 7;9(10):3315-3332. doi: 10.1534/g3.119.400597. G3 (Bethesda). 2019. PMID: 31420323 Free PMC article.
Reply to: Revisiting the origin of octoploid strawberry.
Edger PP, McKain MR, Yocca AE, Knapp SJ, Qiao Q, Zhang T. Edger PP, et al. Nat Genet. 2020 Jan;52(1):5-7. doi: 10.1038/s41588-019-0544-2. Epub 2019 Dec 16. Nat Genet. 2020. PMID: 31844320 Free PMC article. No abstract available.
Evolutionary history and pan-genome dynamics of strawberry (Fragaria spp.).
Qiao Q, Edger PP, Xue L, Qiong L, Lu J, Zhang Y, Cao Q, Yocca AE, Platts AE, Knapp SJ, Van Montagu M, Van de Peer Y, Lei J, Zhang T. Qiao Q, et al. Proc Natl Acad Sci U S A. 2021 Nov 9;118(45):e2105431118. doi: 10.1073/pnas.2105431118. Proc Natl Acad Sci U S A. 2021. PMID: 34697247 Free PMC article.
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