Li J - Search Results

1

Aberration-corrected ultrafine analysis of miRNA reads at single-base resolution: a k-mer lattice approach.

Zhang X, Ping P, Hutvagner G, Blumenstein M, Li J. Zhang X, et al. Among authors: li j. Nucleic Acids Res. 2021 Oct 11;49(18):e106. doi: 10.1093/nar/gkab610. Nucleic Acids Res. 2021. PMID: 34291293 Free PMC article.

2

Rule discovery and distance separation to detect reliable miRNA biomarkers for the diagnosis of lung squamous cell carcinoma.

Song R, Liu Q, Hutvagner G, Nguyen H, Ramamohanarao K, Wong L, Li J. Song R, et al. Among authors: li j. BMC Genomics. 2014;15 Suppl 9(Suppl 9):S16. doi: 10.1186/1471-2164-15-S9-S16. Epub 2014 Dec 8. BMC Genomics. 2014. PMID: 25521201 Free PMC article.

3

Identification of lung cancer miRNA-miRNA co-regulation networks through a progressive data refining approach.

Song R, Catchpoole DR, Kennedy PJ, Li J. Song R, et al. Among authors: li j. J Theor Biol. 2015 Sep 7;380:271-9. doi: 10.1016/j.jtbi.2015.05.025. Epub 2015 May 28. J Theor Biol. 2015. PMID: 26026830

4

Accurate detection for a wide range of mutation and editing sites of microRNAs from small RNA high-throughput sequencing profiles.

Zheng Y, Ji B, Song R, Wang S, Li T, Zhang X, Chen K, Li T, Li J. Zheng Y, et al. Among authors: li t, li j. Nucleic Acids Res. 2016 Aug 19;44(14):e123. doi: 10.1093/nar/gkw471. Epub 2016 May 26. Nucleic Acids Res. 2016. PMID: 27229138 Free PMC article.

5

Grouping miRNAs of similar functions via weighted information content of gene ontology.

Lan C, Chen Q, Li J. Lan C, et al. Among authors: li j. BMC Bioinformatics. 2016 Dec 22;17(Suppl 19):507. doi: 10.1186/s12859-016-1367-0. BMC Bioinformatics. 2016. PMID: 28155659 Free PMC article.

6

MapReduce for accurate error correction of next-generation sequencing data.

Zhao L, Chen Q, Li W, Jiang P, Wong L, Li J. Zhao L, et al. Among authors: li j, li w. Bioinformatics. 2017 Dec 1;33(23):3844-3851. doi: 10.1093/bioinformatics/btx089. Bioinformatics. 2017. PMID: 28205674

7

Cross disease analysis of co-functional microRNA pairs on a reconstructed network of disease-gene-microRNA tripartite.

Peng H, Lan C, Zheng Y, Hutvagner G, Tao D, Li J. Peng H, et al. Among authors: li j. BMC Bioinformatics. 2017 Mar 24;18(1):193. doi: 10.1186/s12859-017-1605-0. BMC Bioinformatics. 2017. PMID: 28340554 Free PMC article.

8

Chromosome preference of disease genes and vectorization for the prediction of non-coding disease genes.

Peng H, Lan C, Liu Y, Liu T, Blumenstein M, Li J. Peng H, et al. Among authors: li j. Oncotarget. 2017 Aug 24;8(45):78901-78916. doi: 10.18632/oncotarget.20481. eCollection 2017 Oct 3. Oncotarget. 2017. PMID: 29108274 Free PMC article.

9

CRISPR/Cas9 cleavage efficiency regression through boosting algorithms and Markov sequence profiling.

Peng H, Zheng Y, Blumenstein M, Tao D, Li J. Peng H, et al. Among authors: li j. Bioinformatics. 2018 Sep 15;34(18):3069-3077. doi: 10.1093/bioinformatics/bty298. Bioinformatics. 2018. PMID: 29672669

10

Bi-level error correction for PacBio long reads.

Liu Y, Lan C, Blumenstein M, Li J. Liu Y, et al. Among authors: li j. IEEE/ACM Trans Comput Biol Bioinform. 2017 Dec 7. doi: 10.1109/TCBB.2017.2780832. Online ahead of print. IEEE/ACM Trans Comput Biol Bioinform. 2017. PMID: 29990239

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