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Promoter-proximal elongation regulates transcription in archaea.
Blombach F, Fouqueau T, Matelska D, Smollett K, Werner F. Blombach F, et al. Among authors: matelska d. Nat Commun. 2021 Sep 17;12(1):5524. doi: 10.1038/s41467-021-25669-2. Nat Commun. 2021. PMID: 34535658 Free PMC article.
Key Concepts and Challenges in Archaeal Transcription.
Blombach F, Matelska D, Fouqueau T, Cackett G, Werner F. Blombach F, et al. Among authors: matelska d. J Mol Biol. 2019 Sep 20;431(20):4184-4201. doi: 10.1016/j.jmb.2019.06.020. Epub 2019 Jun 28. J Mol Biol. 2019. PMID: 31260691 Review.
Structural basis of RNA polymerase inhibition by viral and host factors.
Pilotto S, Fouqueau T, Lukoyanova N, Sheppard C, Lucas-Staat S, Díaz-Santín LM, Matelska D, Prangishvili D, Cheung ACM, Werner F. Pilotto S, et al. Among authors: matelska d. Nat Commun. 2021 Sep 17;12(1):5523. doi: 10.1038/s41467-021-25666-5. Nat Commun. 2021. PMID: 34535646 Free PMC article.
The cutting edge of archaeal transcription.
Fouqueau T, Blombach F, Cackett G, Carty AE, Matelska DM, Ofer S, Pilotto S, Phung DK, Werner F. Fouqueau T, et al. Emerg Top Life Sci. 2018 Dec 14;2(4):517-533. doi: 10.1042/ETLS20180014. Emerg Top Life Sci. 2018. PMID: 33525828 Free PMC article.
The African Swine Fever Virus Transcriptome.
Cackett G, Matelska D, Sýkora M, Portugal R, Malecki M, Bähler J, Dixon L, Werner F. Cackett G, et al. Among authors: matelska d. J Virol. 2020 Apr 16;94(9):e00119-20. doi: 10.1128/JVI.00119-20. Print 2020 Apr 16. J Virol. 2020. PMID: 32075923 Free PMC article.
Computational modeling of protein-RNA complex structures.
Tuszynska I, Matelska D, Magnus M, Chojnowski G, Kasprzak JM, Kozlowski LP, Dunin-Horkawicz S, Bujnicki JM. Tuszynska I, et al. Among authors: matelska d. Methods. 2014 Feb;65(3):310-9. doi: 10.1016/j.ymeth.2013.09.014. Epub 2013 Sep 29. Methods. 2014. PMID: 24083976 Review.
RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures.
Miao Z, Adamiak RW, Blanchet MF, Boniecki M, Bujnicki JM, Chen SJ, Cheng C, Chojnowski G, Chou FC, Cordero P, Cruz JA, Ferré-D'Amaré AR, Das R, Ding F, Dokholyan NV, Dunin-Horkawicz S, Kladwang W, Krokhotin A, Lach G, Magnus M, Major F, Mann TH, Masquida B, Matelska D, Meyer M, Peselis A, Popenda M, Purzycka KJ, Serganov A, Stasiewicz J, Szachniuk M, Tandon A, Tian S, Wang J, Xiao Y, Xu X, Zhang J, Zhao P, Zok T, Westhof E. Miao Z, et al. Among authors: matelska d. RNA. 2015 Jun;21(6):1066-84. doi: 10.1261/rna.049502.114. Epub 2015 Apr 16. RNA. 2015. PMID: 25883046 Free PMC article.
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