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Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning.
Greenwald NF, Miller G, Moen E, Kong A, Kagel A, Dougherty T, Fullaway CC, McIntosh BJ, Leow KX, Schwartz MS, Pavelchek C, Cui S, Camplisson I, Bar-Tal O, Singh J, Fong M, Chaudhry G, Abraham Z, Moseley J, Warshawsky S, Soon E, Greenbaum S, Risom T, Hollmann T, Bendall SC, Keren L, Graf W, Angelo M, Van Valen D. Greenwald NF, et al. Among authors: schwartz ms. Nat Biotechnol. 2022 Apr;40(4):555-565. doi: 10.1038/s41587-021-01094-0. Epub 2021 Nov 18. Nat Biotechnol. 2022. PMID: 34795433 Free PMC article.
A spatially resolved timeline of the human maternal-fetal interface.
Greenbaum S, Averbukh I, Soon E, Rizzuto G, Baranski A, Greenwald NF, Kagel A, Bosse M, Jaswa EG, Khair Z, Kwok S, Warshawsky S, Piyadasa H, Goldston M, Spence A, Miller G, Schwartz M, Graf W, Van Valen D, Winn VD, Hollmann T, Keren L, van de Rijn M, Angelo M. Greenbaum S, et al. Nature. 2023 Jul;619(7970):595-605. doi: 10.1038/s41586-023-06298-9. Epub 2023 Jul 19. Nature. 2023. PMID: 37468587 Free PMC article.
A Foundation Model for Cell Segmentation.
Israel U, Marks M, Dilip R, Li Q, Yu C, Laubscher E, Li S, Schwartz M, Pradhan E, Ates A, Abt M, Brown C, Pao E, Pearson-Goulart A, Perona P, Gkioxari G, Barnowski R, Yue Y, Valen DV. Israel U, et al. bioRxiv [Preprint]. 2024 Mar 7:2023.11.17.567630. doi: 10.1101/2023.11.17.567630. bioRxiv. 2024. PMID: 38045277 Free PMC article. Preprint.
Cellular behavior analysis from live-cell imaging of TCR T cell-cancer cell interactions.
Verma A, Yu C, Bachl S, Lopez I, Schwartz M, Moen E, Kale N, Ching C, Miller G, Dougherty T, Pao E, Graf W, Ward C, Jena S, Marson A, Carnevale J, Van Valen D, Engelhardt BE. Verma A, et al. bioRxiv [Preprint]. 2024 Nov 21:2024.11.19.624390. doi: 10.1101/2024.11.19.624390. bioRxiv. 2024. PMID: 39605616 Free PMC article. Preprint.
304 results