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Genomic structure and diversity of Plasmodium falciparum in Southeast Asia reveal recent parasite migration patterns.
Shetty AC, Jacob CG, Huang F, Li Y, Agrawal S, Saunders DL, Lon C, Fukuda MM, Ringwald P, Ashley EA, Han KT, Hlaing TM, Nyunt MM, Silva JC, Stewart KE, Plowe CV, O'Connor TD, Takala-Harrison S; Artemisinin Resistance Confirmation, Characterization, and Containment (ARC3); Artemisinin Resistance Containment and Elimination (ARCE); Tracking Resistance to Artemisinin Collaboration (TRAC). Shetty AC, et al. Nat Commun. 2019 Jun 17;10(1):2665. doi: 10.1038/s41467-019-10121-3. Nat Commun. 2019. PMID: 31209259 Free PMC article.
Variation in spatial population structure in the Anopheles gambiae species complex.
McCann RS, Courneya JP, Donnelly MJ, Laufer MK, Mzilahowa T, Stewart K, Agossa F, Tezzo FW, Miles A, Takala-Harrison S, O'Connor TD; Ag1000G Consortium. McCann RS, et al. Among authors: o connor td. bioRxiv [Preprint]. 2024 Sep 18:2024.05.26.595955. doi: 10.1101/2024.05.26.595955. bioRxiv. 2024. PMID: 38853983 Free PMC article. Preprint.
Using genotype array data to compare multi- and single-sample variant calls and improve variant call sets from deep coverage whole-genome sequencing data.
Shringarpure SS, Mathias RA, Hernandez RD, O'Connor TD, Szpiech ZA, Torres R, De La Vega FM, Bustamante CD, Barnes KC, Taub MA; CAAPA Consortium. Shringarpure SS, et al. Bioinformatics. 2017 Apr 15;33(8):1147-1153. doi: 10.1093/bioinformatics/btw786. Bioinformatics. 2017. PMID: 28035032 Free PMC article.
81 results