Karpinska MA - Search Results

1

Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture.

Downes DJ, Smith AL, Karpinska MA, Velychko T, Rue-Albrecht K, Sims D, Milne TA, Davies JOJ, Oudelaar AM, Hughes JR. Downes DJ, et al. Among authors: karpinska ma. Nat Protoc. 2022 Feb;17(2):445-475. doi: 10.1038/s41596-021-00651-w. Epub 2022 Feb 4. Nat Protoc. 2022. PMID: 35121852 Free PMC article. Review.

2

Pervasive transcription of the mitochondrial genome in Candida albicans is revealed in mutants lacking the mtEXO RNase complex.

Łabędzka-Dmoch K, Kolondra A, Karpińska MA, Dębek S, Grochowska J, Grochowski M, Piątkowski J, Hoang Diu Bui T, Golik P. Łabędzka-Dmoch K, et al. Among authors: karpinska ma. RNA Biol. 2021 Oct 15;18(sup1):303-317. doi: 10.1080/15476286.2021.1943929. Epub 2021 Jul 7. RNA Biol. 2021. PMID: 34229573 Free PMC article.

3

Analysis of sub-kilobase chromatin topology reveals nano-scale regulatory interactions with variable dependence on cohesin and CTCF.

Aljahani A, Hua P, Karpinska MA, Quililan K, Davies JOJ, Oudelaar AM. Aljahani A, et al. Among authors: karpinska ma. Nat Commun. 2022 Apr 19;13(1):2139. doi: 10.1038/s41467-022-29696-5. Nat Commun. 2022. PMID: 35440598 Free PMC article.

4

The role of loop extrusion in enhancer-mediated gene activation.

Karpinska MA, Oudelaar AM. Karpinska MA, et al. Curr Opin Genet Dev. 2023 Apr;79:102022. doi: 10.1016/j.gde.2023.102022. Epub 2023 Feb 24. Curr Opin Genet Dev. 2023. PMID: 36842325 Free article. Review.

5

Author Correction: Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture.

Downes DJ, Smith AL, Karpinska MA, Velychko T, Rue-Albrecht K, Sims D, Milne TA, Davies JOJ, Oudelaar AM, Hughes JR. Downes DJ, et al. Among authors: karpinska ma. Nat Protoc. 2023 Oct;18(10):3155. doi: 10.1038/s41596-023-00860-5. Nat Protoc. 2023. PMID: 37369851 No abstract available.

6

The Mediator complex regulates enhancer-promoter interactions.

Ramasamy S, Aljahani A, Karpinska MA, Cao TBN, Velychko T, Cruz JN, Lidschreiber M, Oudelaar AM. Ramasamy S, et al. Among authors: karpinska ma. Nat Struct Mol Biol. 2023 Jul;30(7):991-1000. doi: 10.1038/s41594-023-01027-2. Epub 2023 Jul 10. Nat Struct Mol Biol. 2023. PMID: 37430065 Free PMC article.

7

Genome-wide profiling of DNA repair proteins in single cells.

de Luca KL, Rullens PMJ, Karpinska MA, de Vries SS, Gacek-Matthews A, Pongor LS, Legube G, Jachowicz JW, Oudelaar AM, Kind J. de Luca KL, et al. Among authors: karpinska ma. Nat Commun. 2024 Nov 21;15(1):9918. doi: 10.1038/s41467-024-54159-4. Nat Commun. 2024. PMID: 39572529 Free PMC article.

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