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Page 1
COVID-19 Prediction using Genomic Footprint of SARS-CoV-2 in Air, Surface Swab and Wastewater Samples.
Solo-Gabriele HM, Kumar S, Abelson S, Penso J, Contreras J, Babler KM, Sharkey ME, Mantero AMA, Lamar WE, Tallon JJ Jr, Kobetz E, Solle NS, Shukla BS, Kenney RJ, Mason CE, Schürer SC, Vidovic D, Williams SL, Grills GS, Jayaweera DT, Mirsaeidi M, Kumar N. Solo-Gabriele HM, et al. Among authors: grills gs. medRxiv [Preprint]. 2022 Apr 1:2022.03.14.22272314. doi: 10.1101/2022.03.14.22272314. medRxiv. 2022. Update in: Sci Total Environ. 2023 Jan 20;857(Pt 1):159188. doi: 10.1016/j.scitotenv.2022.159188 PMID: 35313580 Free PMC article. Updated. Preprint.
Geospatially-resolved public-health surveillance via wastewater sequencing.
Tierney BT, Foox J, Ryon KA, Butler D, Damle N, Young BG, Mozsary C, Babler KM, Yin X, Carattini Y, Andrews D, Solle NS, Kumar N, Shukla B, Vidovic D, Currall B, Williams SL, Schürer SC, Stevenson M, Amirali A, Beaver CC, Kobetz E, Boone MM, Reding B, Laine J, Comerford S, Lamar WE, Tallon JJ, Hirschberg JW, Proszynski J, Sharkey ME, Church GM, Grills GS, Solo-Gabriele HM, Mason CE. Tierney BT, et al. Among authors: grills gs. medRxiv [Preprint]. 2023 Jun 1:2023.05.31.23290781. doi: 10.1101/2023.05.31.23290781. medRxiv. 2023. Update in: Nat Commun. 2024 Sep 27;15(1):8386. doi: 10.1038/s41467-024-52427-x PMID: 37398062 Free PMC article. Updated. Preprint.
Expanding a Wastewater-Based Surveillance Methodology for DNA Isolation from a Workflow Optimized for SARS-CoV-2 RNA Quantification.
Babler KM, Sharkey ME, Amirali A, Boone MM, Comerford S, Currall BB, Grills GS, Laine J, Mason CE, Reding B, Schürer S, Stevenson M, Vidović D, Williams SL, Solo-Gabriele HM. Babler KM, et al. Among authors: grills gs. J Biomol Tech. 2023 Dec 20;34(4):3fc1f5fe.dfa8d906. doi: 10.7171/3fc1f5fe.dfa8d906. eCollection 2023 Dec. J Biomol Tech. 2023. PMID: 38268997 Free PMC article.
Wastewater based surveillance can be used to reduce clinical testing intensity on a university campus.
Amirali A, Babler KM, Sharkey ME, Beaver CC, Boone MM, Comerford S, Cooper D, Currall BB, Goodman KW, Grills GS, Kobetz E, Kumar N, Laine J, Lamar WE, Mason CE, Reding BD, Roca MA, Ryon K, Schürer SC, Shukla BS, Solle NS, Stevenson M, Tallon JJ Jr, Vidović D, Williams SL, Yin X, Solo-Gabriele HM. Amirali A, et al. Among authors: grills gs. Sci Total Environ. 2024 Mar 25;918:170452. doi: 10.1016/j.scitotenv.2024.170452. Epub 2024 Jan 29. Sci Total Environ. 2024. PMID: 38296085
Correlative analysis of wastewater trends with clinical cases and hospitalizations through five dominant variant waves of COVID-19.
Zhan Q, Solo-Gabriele HM, Sharkey ME, Amirali A, Beaver CC, Boone MM, Comerford S, Cooper D, Cortizas EM, Cosculluela GA, Currall BB, Grills GS, Kobetz E, Kumar N, Laine J, Lamar WE, Lyu J, Mason CE, Reding BD, Roca MA, Schürer SC, Shukla BS, Solle NS, Suarez MM, Stevenson M, Tallon JJ Jr, Thomas C, Vidović D, Williams SL, Yin X, Zarnegarnia Y, Babler KM. Zhan Q, et al. Among authors: grills gs. ACS ES T Water. 2023 Sep 8;3(9):2849-2862. doi: 10.1021/acsestwater.3c00032. Epub 2023 Aug 22. ACS ES T Water. 2023. PMID: 38487696 Free PMC article.
Towards geospatially-resolved public-health surveillance via wastewater sequencing.
Tierney BT, Foox J, Ryon KA, Butler D, Damle N, Young BG, Mozsary C, Babler KM, Yin X, Carattini Y, Andrews D, Lucaci AG, Solle NS, Kumar N, Shukla B, Vidović D, Currall B, Williams SL, Schürer SC, Stevenson M, Amirali A, Beaver CC, Kobetz E, Boone MM, Reding B, Laine J, Comerford S, Lamar WE, Tallon JJ Jr, Wain Hirschberg J, Proszynski J, Al Ghalith G, Can Kurt K, Sharkey ME, Church GM, Grills GS, Solo-Gabriele HM, Mason CE. Tierney BT, et al. Among authors: grills gs. Nat Commun. 2024 Sep 27;15(1):8386. doi: 10.1038/s41467-024-52427-x. Nat Commun. 2024. PMID: 39333485 Free PMC article.
Comparison of Electronegative Filtration to Magnetic Bead-Based Concentration and V2G-qPCR to RT-qPCR for Quantifying Viral SARS-CoV-2 RNA from Wastewater.
Babler KM, Amirali A, Sharkey ME, Williams SL, Boone MM, Cosculluela GA, Currall BB, Grills GS, Laine J, Mason CE, Reding BD, Schürer SC, Stevenson M, Vidovic D, Solo-Gabriele HM. Babler KM, et al. Among authors: grills gs. ACS ES T Water. 2022 Nov 11;2(11):2004-2013. doi: 10.1021/acsestwater.2c00047. Epub 2022 May 17. ACS ES T Water. 2022. PMID: 37601294 Free PMC article.
Monkeypox viral nucleic acids detected using both DNA and RNA extraction workflows.
Sharkey ME, Babler KM, Shukla BS, Abelson SM, Alsuliman B, Amirali A, Comerford S, Grills GS, Kumar N, Laine J, Lee J, Lamar WE, Mason CE, Penso J, Reding BD, Schürer SC, Stevenson M, Vidović D, Solo-Gabriele HM. Sharkey ME, et al. Among authors: grills gs. Sci Total Environ. 2023 Sep 10;890:164289. doi: 10.1016/j.scitotenv.2023.164289. Epub 2023 May 20. Sci Total Environ. 2023. PMID: 37216988 Free PMC article.
26 results