Peterson EJR - Search Results

1

Mathematical models to study the biology of pathogens and the infectious diseases they cause.

Xavier JB, Monk JM, Poudel S, Norsigian CJ, Sastry AV, Liao C, Bento J, Suchard MA, Arrieta-Ortiz ML, Peterson EJR, Baliga NS, Stoeger T, Ruffin F, Richardson RAK, Gao CA, Horvath TD, Haag AM, Wu Q, Savidge T, Yeaman MR. Xavier JB, et al. Among authors: peterson ejr. iScience. 2022 Mar 15;25(4):104079. doi: 10.1016/j.isci.2022.104079. eCollection 2022 Apr 15. iScience. 2022. PMID: 35359802 Free PMC article. Review.

2

A comprehensive map of genome-wide gene regulation in Mycobacterium tuberculosis.

Turkarslan S, Peterson EJ, Rustad TR, Minch KJ, Reiss DJ, Morrison R, Ma S, Price ND, Sherman DR, Baliga NS. Turkarslan S, et al. Sci Data. 2015 Mar 31;2:150010. doi: 10.1038/sdata.2015.10. eCollection 2015. Sci Data. 2015. PMID: 25977815 Free PMC article.

3

Network analysis identifies Rv0324 and Rv0880 as regulators of bedaquiline tolerance in Mycobacterium tuberculosis.

Peterson EJR, Ma S, Sherman DR, Baliga NS. Peterson EJR, et al. Nat Microbiol. 2016 Jun 6;1(8):16078. doi: 10.1038/nmicrobiol.2016.78. Nat Microbiol. 2016. PMID: 27573104 Free PMC article.

4

Path-seq identifies an essential mycolate remodeling program for mycobacterial host adaptation.

Peterson EJ, Bailo R, Rothchild AC, Arrieta-Ortiz ML, Kaur A, Pan M, Mai D, Abidi AA, Cooper C, Aderem A, Bhatt A, Baliga NS. Peterson EJ, et al. Mol Syst Biol. 2019 Mar 4;15(3):e8584. doi: 10.15252/msb.20188584. Mol Syst Biol. 2019. PMID: 30833303 Free PMC article.

5

Intricate Genetic Programs Controlling Dormancy in Mycobacterium tuberculosis.

Peterson EJR, Abidi AA, Arrieta-Ortiz ML, Aguilar B, Yurkovich JT, Kaur A, Pan M, Srinivas V, Shmulevich I, Baliga NS. Peterson EJR, et al. Cell Rep. 2020 Apr 28;31(4):107577. doi: 10.1016/j.celrep.2020.107577. Cell Rep. 2020. PMID: 32348771 Free PMC article.

6

PerSort Facilitates Characterization and Elimination of Persister Subpopulation in Mycobacteria.

Srinivas V, Arrieta-Ortiz ML, Kaur A, Peterson EJR, Baliga NS. Srinivas V, et al. Among authors: peterson ejr. mSystems. 2020 Dec 1;5(6):e01127-20. doi: 10.1128/mSystems.01127-20. mSystems. 2020. PMID: 33262242 Free PMC article.

7

A systems-level gene regulatory network model for Plasmodium falciparum.

Neal ML, Wei L, Peterson E, Arrieta-Ortiz ML, Danziger SA, Baliga NS, Kaushansky A, Aitchison JD. Neal ML, et al. Nucleic Acids Res. 2021 May 21;49(9):4891-4906. doi: 10.1093/nar/gkaa1245. Nucleic Acids Res. 2021. PMID: 33450011 Free PMC article.

8

Mycobacterium abscessus biofilms produce an extracellular matrix and have a distinct mycolic acid profile.

Dokic A, Peterson E, Arrieta-Ortiz ML, Pan M, Di Maio A, Baliga N, Bhatt A. Dokic A, et al. Cell Surf. 2021 Apr 6;7:100051. doi: 10.1016/j.tcsw.2021.100051. eCollection 2021 Dec. Cell Surf. 2021. PMID: 33912773 Free PMC article.

9

Intricate Genetic Programs Controlling Dormancy in Mycobacterium tuberculosis.

Peterson EJR, Abidi AA, Arrieta-Ortiz ML, Aguilar B, Yurkovich JT, Kaur A, Pan M, Srinivas V, Shmulevich I, Baliga NS. Peterson EJR, et al. Cell Rep. 2021 Jun 15;35(11):109287. doi: 10.1016/j.celrep.2021.109287. Cell Rep. 2021. PMID: 34133939 Free PMC article. No abstract available.

10

Quantitative prediction of conditional vulnerabilities in regulatory and metabolic networks using PRIME.

Immanuel SRC, Arrieta-Ortiz ML, Ruiz RA, Pan M, Lopez Garcia de Lomana A, Peterson EJR, Baliga NS. Immanuel SRC, et al. Among authors: peterson ejr. NPJ Syst Biol Appl. 2021 Dec 6;7(1):43. doi: 10.1038/s41540-021-00205-6. NPJ Syst Biol Appl. 2021. PMID: 34873198 Free PMC article.

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