Liu Q - Search Results

1

PredPromoter-MF(2L): A Novel Approach of Promoter Prediction Based on Multi-source Feature Fusion and Deep Forest.

Wang M, Li F, Wu H, Liu Q, Li S. Wang M, et al. Among authors: liu q. Interdiscip Sci. 2022 Sep;14(3):697-711. doi: 10.1007/s12539-022-00520-4. Epub 2022 Apr 30. Interdiscip Sci. 2022. PMID: 35488998

2

PRISMOID: a comprehensive 3D structure database for post-translational modifications and mutations with functional impact.

Li F, Fan C, Marquez-Lago TT, Leier A, Revote J, Jia C, Zhu Y, Smith AI, Webb GI, Liu Q, Wei L, Li J, Song J. Li F, et al. Among authors: liu q. Brief Bioinform. 2020 May 21;21(3):1069-1079. doi: 10.1093/bib/bbz050. Brief Bioinform. 2020. PMID: 31161204 Free PMC article.

3

DeepCleave: a deep learning predictor for caspase and matrix metalloprotease substrates and cleavage sites.

Li F, Chen J, Leier A, Marquez-Lago T, Liu Q, Wang Y, Revote J, Smith AI, Akutsu T, Webb GI, Kurgan L, Song J. Li F, et al. Among authors: liu q. Bioinformatics. 2020 Feb 15;36(4):1057-1065. doi: 10.1093/bioinformatics/btz721. Bioinformatics. 2020. PMID: 31566664 Free PMC article.

4

Procleave: Predicting Protease-specific Substrate Cleavage Sites by Combining Sequence and Structural Information.

Li F, Leier A, Liu Q, Wang Y, Xiang D, Akutsu T, Webb GI, Smith AI, Marquez-Lago T, Li J, Song J. Li F, et al. Among authors: liu q. Genomics Proteomics Bioinformatics. 2020 Feb;18(1):52-64. doi: 10.1016/j.gpb.2019.08.002. Epub 2020 May 12. Genomics Proteomics Bioinformatics. 2020. PMID: 32413515 Free PMC article.

5

DeepTorrent: a deep learning-based approach for predicting DNA N4-methylcytosine sites.

Liu Q, Chen J, Wang Y, Li S, Jia C, Song J, Li F. Liu Q, et al. Brief Bioinform. 2021 May 20;22(3):bbaa124. doi: 10.1093/bib/bbaa124. Brief Bioinform. 2021. PMID: 32608476 Free PMC article.

6

Large-scale comparative review and assessment of computational methods for anti-cancer peptide identification.

Liang X, Li F, Chen J, Li J, Wu H, Li S, Song J, Liu Q. Liang X, et al. Among authors: liu q. Brief Bioinform. 2021 Jul 20;22(4):bbaa312. doi: 10.1093/bib/bbaa312. Brief Bioinform. 2021. PMID: 33316035 Free PMC article. Review.

7

Integrating Protein-Protein Interaction Networks and Somatic Mutation Data to Detect Driver Modules in Pan-Cancer.

Wu H, Chen Z, Wu Y, Zhang H, Liu Q. Wu H, et al. Among authors: liu q. Interdiscip Sci. 2022 Mar;14(1):151-167. doi: 10.1007/s12539-021-00475-y. Epub 2021 Sep 7. Interdiscip Sci. 2022. PMID: 34491536

8

scHiCStackL: a stacking ensemble learning-based method for single-cell Hi-C classification using cell embedding.

Wu H, Wu Y, Jiang Y, Zhou B, Zhou H, Chen Z, Xiong Y, Liu Q, Zhang H. Wu H, et al. Among authors: liu q. Brief Bioinform. 2022 Jan 17;23(1):bbab396. doi: 10.1093/bib/bbab396. Brief Bioinform. 2022. PMID: 34553746

9

BigFiRSt: A Software Program Using Big Data Technique for Mining Simple Sequence Repeats From Large-Scale Sequencing Data.

Chen J, Li F, Wang M, Li J, Marquez-Lago TT, Leier A, Revote J, Li S, Liu Q, Song J. Chen J, et al. Among authors: liu q. Front Big Data. 2022 Jan 18;4:727216. doi: 10.3389/fdata.2021.727216. eCollection 2021. Front Big Data. 2022. PMID: 35118375 Free PMC article.

10

Integrating multi-omics data to identify dysregulated modules in endometrial cancer.

Chen Z, Liang B, Wu Y, Liu Q, Zhang H, Wu H. Chen Z, et al. Among authors: liu q. Brief Funct Genomics. 2022 Jul 27;21(4):310-324. doi: 10.1093/bfgp/elac010. Brief Funct Genomics. 2022. PMID: 35652472

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