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TOP-LD: A tool to explore linkage disequilibrium with TOPMed whole-genome sequence data.
Huang L, Rosen JD, Sun Q, Chen J, Wheeler MM, Zhou Y, Min YI, Kooperberg C, Conomos MP, Stilp AM, Rich SS, Rotter JI, Manichaikul A, Loos RJF, Kenny EE, Blackwell TW, Smith AV, Jun G, Sedlazeck FJ, Metcalf G, Boerwinkle E; NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium; Raffield LM, Reiner AP, Auer PL, Li Y. Huang L, et al. Am J Hum Genet. 2022 Jun 2;109(6):1175-1181. doi: 10.1016/j.ajhg.2022.04.006. Epub 2022 May 2. Am J Hum Genet. 2022. PMID: 35504290 Free PMC article.
Analyses of biomarker traits in diverse UK biobank participants identify associations missed by European-centric analysis strategies.
Sun Q, Graff M, Rowland B, Wen J, Huang L, Miller-Fleming TW, Haessler J, Preuss MH, Chai JF, Lee MP, Avery CL, Cheng CY, Franceschini N, Sim X, Cox NJ, Kooperberg C, North KE, Li Y, Raffield LM. Sun Q, et al. Among authors: huang l. J Hum Genet. 2022 Feb;67(2):87-93. doi: 10.1038/s10038-021-00968-0. Epub 2021 Aug 11. J Hum Genet. 2022. PMID: 34376796 Free PMC article.
Leveraging TOPMed imputation server and constructing a cohort-specific imputation reference panel to enhance genotype imputation among cystic fibrosis patients.
Sun Q, Liu W, Rosen JD, Huang L, Pace RG, Dang H, Gallins PJ, Blue EE, Ling H, Corvol H, Strug LJ, Bamshad MJ, Gibson RL, Pugh EW, Blackman SM, Cutting GR, O'Neal WK, Zhou YH, Wright FA, Knowles MR, Wen J, Li Y; Cystic Fibrosis Genome Project. Sun Q, et al. Among authors: huang l. HGG Adv. 2022 Jan 11;3(2):100090. doi: 10.1016/j.xhgg.2022.100090. eCollection 2022 Apr 14. HGG Adv. 2022. PMID: 35128485 Free PMC article.
Gene Expression and Splicing QTL Analysis of Blood Cells in African American Participants from the Jackson Heart Study.
Wen J, Sun Q, Huang L, Zhou L, Doyle MF, Ekunwe L, Olson NC, Reiner AP, Li Y, Raffield LM. Wen J, et al. Among authors: huang l. bioRxiv [Preprint]. 2023 Apr 29:2023.04.26.538455. doi: 10.1101/2023.04.26.538455. bioRxiv. 2023. Update in: Genetics. 2024 Sep 4;228(1):iyae098. doi: 10.1093/genetics/iyae098 PMID: 37163084 Free PMC article. Updated. Preprint.
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