Soto C - Search Results

1

AIRR Community Guide to Planning and Performing AIRR-Seq Experiments.

Eugster A, Bostick ML, Gupta N, Mariotti-Ferrandiz E, Kraus G, Meng W, Soto C, Trück J, Stervbo U, Luning Prak ET; AIRR Community. Eugster A, et al. Among authors: soto c. Methods Mol Biol. 2022;2453:261-278. doi: 10.1007/978-1-0716-2115-8_15. Methods Mol Biol. 2022. PMID: 35622331 Free PMC article.

2

Bulk Sequencing from mRNA with UMI for Evaluation of B-Cell Isotype and Clonal Evolution: A Method by the AIRR Community.

Gupta N, Marquez S, Soto C, Chen EC, Bostick ML, Stervbo U, Farmer A. Gupta N, et al. Among authors: soto c. Methods Mol Biol. 2022;2453:345-377. doi: 10.1007/978-1-0716-2115-8_19. Methods Mol Biol. 2022. PMID: 35622335 Free PMC article.

3

Biological controls for standardization and interpretation of adaptive immune receptor repertoire profiling.

Trück J, Eugster A, Barennes P, Tipton CM, Luning Prak ET, Bagnara D, Soto C, Sherkow JS, Payne AS, Lefranc MP, Farmer A; AIRR Community; Bostick M, Mariotti-Ferrandiz E. Trück J, et al. Among authors: soto c. Elife. 2021 May 26;10:e66274. doi: 10.7554/eLife.66274. Elife. 2021. PMID: 34037521 Free PMC article. Review.

4

The Future of Blood Testing Is the Immunome.

Arnaout RA, Prak ETL, Schwab N, Rubelt F; Adaptive Immune Receptor Repertoire Community. Arnaout RA, et al. Front Immunol. 2021 Mar 15;12:626793. doi: 10.3389/fimmu.2021.626793. eCollection 2021. Front Immunol. 2021. PMID: 33790897 Free PMC article.

5

Immune repertoire fingerprinting by principal component analysis reveals shared features in subject groups with common exposures.

Sevy AM, Soto C, Bombardi RG, Meiler J, Crowe JE Jr. Sevy AM, et al. Among authors: soto c. BMC Bioinformatics. 2019 Dec 4;20(1):629. doi: 10.1186/s12859-019-3281-8. BMC Bioinformatics. 2019. PMID: 31801472 Free PMC article.

6

Determination of the physiological dimer interface of the PhoQ sensor domain.

Goldberg SD, Soto CS, Waldburger CD, Degrado WF. Goldberg SD, et al. J Mol Biol. 2008 Jun 13;379(4):656-65. doi: 10.1016/j.jmb.2008.04.023. Epub 2008 Apr 16. J Mol Biol. 2008. PMID: 18468622 Free PMC article.

7

Human-likeness of antibody biologics determined by back-translation and comparison with large antibody variable gene repertoires.

Schmitz S, Soto C, Crowe JE Jr, Meiler J. Schmitz S, et al. Among authors: soto c. MAbs. 2020 Jan-Dec;12(1):1758291. doi: 10.1080/19420862.2020.1758291. MAbs. 2020. PMID: 32397786 Free PMC article.

8

Diverse patterns of antibody variable gene repertoire disruption in patients with amyloid light chain (AL) amyloidosis.

Chen EC, Rubinstein S, Soto C, Bombardi RG, Day SB, Myers L, Zaytsev A, Majedi M, Cornell RF, Crowe JE Jr. Chen EC, et al. Among authors: soto c. PLoS One. 2020 Jul 7;15(7):e0235713. doi: 10.1371/journal.pone.0235713. eCollection 2020. PLoS One. 2020. PMID: 32634163 Free PMC article.

9

A photon-free approach to transmembrane protein structure determination.

Soto CS, Hannigan BT, DeGrado WF. Soto CS, et al. J Mol Biol. 2011 Dec 9;414(4):596-610. doi: 10.1016/j.jmb.2011.10.016. Epub 2011 Oct 15. J Mol Biol. 2011. PMID: 22024595 Free PMC article.

10

ClonoMatch: a tool for identifying homologous immunoglobulin and T-cell receptor sequences in large databases.

Jones T, Day SB, Myers L, Crowe JE, Soto C. Jones T, et al. Among authors: soto c. Bioinformatics. 2021 Apr 5;36(24):5695-5697. doi: 10.1093/bioinformatics/btaa1028. Bioinformatics. 2021. PMID: 33325481 Free PMC article.

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