Ji X - Search Results

1

BRD2 interconnects with BRD3 to facilitate Pol II transcription initiation and elongation to prime promoters for cell differentiation.

Wang C, Xu Q, Zhang X, Day DS, Abraham BJ, Lun K, Chen L, Huang J, Ji X. Wang C, et al. Among authors: ji x. Cell Mol Life Sci. 2022 Jun 4;79(6):338. doi: 10.1007/s00018-022-04349-4. Cell Mol Life Sci. 2022. PMID: 35665862 Free PMC article.

2

SR proteins collaborate with 7SK and promoter-associated nascent RNA to release paused polymerase.

Ji X, Zhou Y, Pandit S, Huang J, Li H, Lin CY, Xiao R, Burge CB, Fu XD. Ji X, et al. Cell. 2013 May 9;153(4):855-68. doi: 10.1016/j.cell.2013.04.028. Cell. 2013. PMID: 23663783 Free PMC article.

3

Chromatin proteomic profiling reveals novel proteins associated with histone-marked genomic regions.

Ji X, Dadon DB, Abraham BJ, Lee TI, Jaenisch R, Bradner JE, Young RA. Ji X, et al. Proc Natl Acad Sci U S A. 2015 Mar 24;112(12):3841-6. doi: 10.1073/pnas.1502971112. Epub 2015 Mar 9. Proc Natl Acad Sci U S A. 2015. PMID: 25755260 Free PMC article.

4

Transcription factor trapping by RNA in gene regulatory elements.

Sigova AA, Abraham BJ, Ji X, Molinie B, Hannett NM, Guo YE, Jangi M, Giallourakis CC, Sharp PA, Young RA. Sigova AA, et al. Among authors: ji x. Science. 2015 Nov 20;350(6263):978-81. doi: 10.1126/science.aad3346. Epub 2015 Oct 29. Science. 2015. PMID: 26516199 Free PMC article.

5

BAT Hi-C maps global chromatin interactions in an efficient and economical way.

Huang J, Jiang Y, Zheng H, Ji X. Huang J, et al. Among authors: ji x. Methods. 2020 Jan 1;170:38-47. doi: 10.1016/j.ymeth.2019.08.004. Epub 2019 Aug 20. Methods. 2020. PMID: 31442560

6

Genome-wide analyses of chromatin interactions after the loss of Pol I, Pol II, and Pol III.

Jiang Y, Huang J, Lun K, Li B, Zheng H, Li Y, Zhou R, Duan W, Wang C, Feng Y, Yao H, Li C, Ji X. Jiang Y, et al. Among authors: ji x. Genome Biol. 2020 Jul 2;21(1):158. doi: 10.1186/s13059-020-02067-3. Genome Biol. 2020. PMID: 32616013 Free PMC article.

7

Transcription shapes DNA replication initiation to preserve genome integrity.

Liu Y, Ai C, Gan T, Wu J, Jiang Y, Liu X, Lu R, Gao N, Li Q, Ji X, Hu J. Liu Y, et al. Among authors: ji x. Genome Biol. 2021 Jun 9;22(1):176. doi: 10.1186/s13059-021-02390-3. Genome Biol. 2021. PMID: 34108027 Free PMC article.

8

Targeted protein degradation reveals RNA Pol II heterogeneity and functional diversity.

Li Y, Huang J, Zhu J, Bao L, Wang H, Jiang Y, Tian K, Wang R, Zheng H, Duan W, Lai W, Yi X, Zhu Y, Guo T, Ji X. Li Y, et al. Among authors: ji x. Mol Cell. 2022 Oct 20;82(20):3943-3959.e11. doi: 10.1016/j.molcel.2022.08.023. Epub 2022 Sep 15. Mol Cell. 2022. PMID: 36113479 Free article.

9

CTCF DNA-binding domain undergoes dynamic and selective protein-protein interactions.

Zhou R, Tian K, Huang J, Duan W, Fu H, Feng Y, Wang H, Jiang Y, Li Y, Wang R, Hu J, Ma H, Qi Z, Ji X. Zhou R, et al. Among authors: ji x. iScience. 2022 Aug 24;25(9):105011. doi: 10.1016/j.isci.2022.105011. eCollection 2022 Sep 16. iScience. 2022. PMID: 36117989 Free PMC article.

10

The transcriptional coactivator RUVBL2 regulates Pol II clustering with diverse transcription factors.

Wang H, Li B, Zuo L, Wang B, Yan Y, Tian K, Zhou R, Wang C, Chen X, Jiang Y, Zheng H, Qin F, Zhang B, Yu Y, Liu CP, Xu Y, Gao J, Qi Z, Deng W, Ji X. Wang H, et al. Among authors: ji x. Nat Commun. 2022 Sep 28;13(1):5703. doi: 10.1038/s41467-022-33433-3. Nat Commun. 2022. PMID: 36171202 Free PMC article.

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