Zhou H - Search Results

1

Measuring thermodynamic preferences to form non-native conformations in nucleic acids using ultraviolet melting.

Rangadurai A, Shi H, Xu Y, Liu B, Abou Assi H, Boom JD, Zhou H, Kimsey IJ, Al-Hashimi HM. Rangadurai A, et al. Among authors: zhou h. Proc Natl Acad Sci U S A. 2022 Jun 14;119(24):e2112496119. doi: 10.1073/pnas.2112496119. Epub 2022 Jun 7. Proc Natl Acad Sci U S A. 2022. PMID: 35671421 Free PMC article.

2

Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.

Sathyamoorthy B, Shi H, Zhou H, Xue Y, Rangadurai A, Merriman DK, Al-Hashimi HM. Sathyamoorthy B, et al. Among authors: zhou h. Nucleic Acids Res. 2017 May 19;45(9):5586-5601. doi: 10.1093/nar/gkx186. Nucleic Acids Res. 2017. PMID: 28369571 Free PMC article.

3

Why are Hoogsteen base pairs energetically disfavored in A-RNA compared to B-DNA?

Rangadurai A, Zhou H, Merriman DK, Meiser N, Liu B, Shi H, Szymanski ES, Al-Hashimi HM. Rangadurai A, et al. Among authors: zhou h. Nucleic Acids Res. 2018 Nov 16;46(20):11099-11114. doi: 10.1093/nar/gky885. Nucleic Acids Res. 2018. PMID: 30285154 Free PMC article.

4

New insights into Hoogsteen base pairs in DNA duplexes from a structure-based survey.

Zhou H, Hintze BJ, Kimsey IJ, Sathyamoorthy B, Yang S, Richardson JS, Al-Hashimi HM. Zhou H, et al. Nucleic Acids Res. 2015 Apr 20;43(7):3420-33. doi: 10.1093/nar/gkv241. Epub 2015 Mar 26. Nucleic Acids Res. 2015. PMID: 25813047 Free PMC article. Review.

5

m(1)A and m(1)G disrupt A-RNA structure through the intrinsic instability of Hoogsteen base pairs.

Zhou H, Kimsey IJ, Nikolova EN, Sathyamoorthy B, Grazioli G, McSally J, Bai T, Wunderlich CH, Kreutz C, Andricioaei I, Al-Hashimi HM. Zhou H, et al. Nat Struct Mol Biol. 2016 Sep;23(9):803-10. doi: 10.1038/nsmb.3270. Epub 2016 Aug 1. Nat Struct Mol Biol. 2016. PMID: 27478929 Free PMC article.

6

Robust IR-based detection of stable and fractionally populated G-C⁺ and A-T Hoogsteen base pairs in duplex DNA.

Stelling AL, Xu Y, Zhou H, Choi SH, Clay MC, Merriman DK, Al-Hashimi HM. Stelling AL, et al. Among authors: zhou h. FEBS Lett. 2017 Jun;591(12):1770-1784. doi: 10.1002/1873-3468.12681. Epub 2017 Jun 19. FEBS Lett. 2017. PMID: 28524232 Free PMC article.

7

Characterizing Watson-Crick versus Hoogsteen Base Pairing in a DNA-Protein Complex Using Nuclear Magnetic Resonance and Site-Specifically ¹³C- and ¹⁵N-Labeled DNA.

Zhou H, Sathyamoorthy B, Stelling A, Xu Y, Xue Y, Pigli YZ, Case DA, Rice PA, Al-Hashimi HM. Zhou H, et al. Biochemistry. 2019 Apr 16;58(15):1963-1974. doi: 10.1021/acs.biochem.9b00027. Epub 2019 Apr 5. Biochemistry. 2019. PMID: 30950607 Free PMC article.

8

A historical account of Hoogsteen base-pairs in duplex DNA.

Nikolova EN, Zhou H, Gottardo FL, Alvey HS, Kimsey IJ, Al-Hashimi HM. Nikolova EN, et al. Among authors: zhou h. Biopolymers. 2013 Dec;99(12):955-68. doi: 10.1002/bip.22334. Biopolymers. 2013. PMID: 23818176 Free PMC article.

9

Incorporating residual dipolar couplings into the NMR solution structure determination of nucleic acids.

Zhou H, Vermeulen A, Jucker FM, Pardi A. Zhou H, et al. Biopolymers. 1999-2000;52(4):168-80. doi: 10.1002/1097-0282(1999)52:4<168::AID-BIP1002>3.0.CO;2-7. Biopolymers. 1999. PMID: 11295749 Review.

10

Covalent attachment of ethidium to DNA results in enhanced topoisomerase II-mediated DNA cleavage.

Marx G, Zhou H, Graves DE, Osheroff N. Marx G, et al. Among authors: zhou h. Biochemistry. 1997 Dec 16;36(50):15884-91. doi: 10.1021/bi971858c. Biochemistry. 1997. PMID: 9398321

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