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Within-host diversity improves phylogenetic and transmission reconstruction of SARS-CoV-2 outbreaks.
Ortiz AT, Kendall M, Storey N, Hatcher J, Dunn H, Roy S, Williams R, Williams C, Goldstein RA, Didelot X, Harris K, Breuer J, Grandjean L. Ortiz AT, et al. Among authors: grandjean l. bioRxiv [Preprint]. 2022 Jun 7:2022.06.07.495142. doi: 10.1101/2022.06.07.495142. bioRxiv. 2022. Update in: Elife. 2023 Sep 21;12:e84384. doi: 10.7554/eLife.84384 PMID: 35702156 Free PMC article. Updated. Preprint.
The Influence of Time on the Sensitivity of SARS-CoV-2 Serological Testing.
Ortiz AT, Torrente FF, Twigg A, Hatcher J, Saso A, Lam T, Johnson M, Wagstaffe H, Dhillon R, Mai AL, Goldblatt D, Still R, Buckland M, Gilmour K, Grandjean L. Ortiz AT, et al. Among authors: grandjean l. Res Sq [Preprint]. 2022 Feb 17:rs.3.rs-1286644. doi: 10.21203/rs.3.rs-1286644/v1. Res Sq. 2022. Update in: Sci Rep. 2022 Jun 22;12(1):10517. doi: 10.1038/s41598-022-14351-2 PMID: 35194596 Free PMC article. Updated. Preprint.
Quantifying patient- and hospital-level antimicrobial resistance dynamics in Staphylococcus aureus from routinely collected data.
Leclerc Q, Clements A, Dunn H, Hatcher J, Lindsay JA, Grandjean L, Knight GM. Leclerc Q, et al. Among authors: grandjean l. medRxiv [Preprint]. 2023 Feb 16:2023.02.15.23285946. doi: 10.1101/2023.02.15.23285946. medRxiv. 2023. Update in: J Med Microbiol. 2023 Jul;72(7). doi: 10.1099/jmm.0.001724 PMID: 36824943 Free PMC article. Updated. Preprint.
Phylogenetic Survival Analysis.
Torres Ortiz A, Grandjean L. Torres Ortiz A, et al. Among authors: grandjean l. Methods Mol Biol. 2024;2833:121-128. doi: 10.1007/978-1-0716-3981-8_12. Methods Mol Biol. 2024. PMID: 38949706
Antimicrobial resistance-attributable mortality: a patient-level analysis.
Baltas I, Rawson TM, Houston H, Grandjean L, Pollara G. Baltas I, et al. Among authors: grandjean l. JAC Antimicrob Resist. 2024 Dec 19;6(6):dlae202. doi: 10.1093/jacamr/dlae202. eCollection 2024 Dec. JAC Antimicrob Resist. 2024. PMID: 39703831 Free PMC article.
137 results