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Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing.
Sereika M, Kirkegaard RH, Karst SM, Michaelsen TY, Sørensen EA, Wollenberg RD, Albertsen M. Sereika M, et al. Among authors: michaelsen ty. Nat Methods. 2022 Jul;19(7):823-826. doi: 10.1038/s41592-022-01539-7. Epub 2022 Jul 4. Nat Methods. 2022. PMID: 35789207 Free PMC article.
Risk of hospitalisation associated with infection with SARS-CoV-2 lineage B.1.1.7 in Denmark: an observational cohort study.
Bager P, Wohlfahrt J, Fonager J, Rasmussen M, Albertsen M, Michaelsen TY, Møller CH, Ethelberg S, Legarth R, Button MSF, Gubbels S, Voldstedlund M, Mølbak K, Skov RL, Fomsgaard A, Krause TG; Danish Covid-19 Genome Consortium. Bager P, et al. Among authors: michaelsen ty. Lancet Infect Dis. 2021 Nov;21(11):1507-1517. doi: 10.1016/S1473-3099(21)00290-5. Epub 2021 Jun 23. Lancet Infect Dis. 2021. PMID: 34171231 Free PMC article.
Increased transmissibility of SARS-CoV-2 lineage B.1.1.7 by age and viral load.
Lyngse FP, Mølbak K, Skov RL, Christiansen LE, Mortensen LH, Albertsen M, Møller CH, Krause TG, Rasmussen M, Michaelsen TY, Voldstedlund M, Fonager J, Steenhard N; Danish Covid-19 Genome Consortium; Kirkeby CT. Lyngse FP, et al. Among authors: michaelsen ty. Nat Commun. 2021 Dec 13;12(1):7251. doi: 10.1038/s41467-021-27202-x. Nat Commun. 2021. PMID: 34903718 Free PMC article.
High-resolution epidemiological landscape from  ~290,000 SARS-CoV-2 genomes from Denmark.
Khurana MP, Curran-Sebastian J, Scheidwasser N, Morgenstern C, Rasmussen M, Fonager J, Stegger M, Tang ME, Juul JL, Escobar-Herrera LA, Møller FT; Danish COVID-19 Genome Consortium (DCGC); Albertsen M, Kraemer MUG, du Plessis L, Jokelainen P, Lehmann S, Krause TG, Ullum H, Duchêne DA, Mortensen LH, Bhatt S. Khurana MP, et al. Nat Commun. 2024 Aug 20;15(1):7123. doi: 10.1038/s41467-024-51371-0. Nat Commun. 2024. PMID: 39164246 Free PMC article.
23 results