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Distinct cell type-specific protein signatures in GRN and MAPT genetic subtypes of frontotemporal dementia.
Miedema SSM, Mol MO, Koopmans FTW, Hondius DC, van Nierop P, Menden K, de Veij Mestdagh CF, van Rooij J, Ganz AB, Paliukhovich I, Melhem S, Li KW, Holstege H, Rizzu P, van Kesteren RE, van Swieten JC, Heutink P, Smit AB. Miedema SSM, et al. Among authors: menden k. Acta Neuropathol Commun. 2022 Jul 7;10(1):100. doi: 10.1186/s40478-022-01387-8. Acta Neuropathol Commun. 2022. PMID: 35799292 Free PMC article.
Evidence for GRN connecting multiple neurodegenerative diseases.
Nalls MA, Blauwendraat C, Sargent L, Vitale D, Leonard H, Iwaki H, Song Y, Bandres-Ciga S, Menden K, Faghri F, Heutink P, Cookson MR, Singleton AB. Nalls MA, et al. Among authors: menden k. Brain Commun. 2021 May 1;3(2):fcab095. doi: 10.1093/braincomms/fcab095. eCollection 2021. Brain Commun. 2021. PMID: 34693284 Free PMC article.
A multi-omics dataset for the analysis of frontotemporal dementia genetic subtypes.
Menden K, Francescatto M, Nyima T, Blauwendraat C, Dhingra A, Castillo-Lizardo M, Fernandes N, Kaurani L, Kronenberg-Versteeg D, Atasu B, Sadikoglou E, Borroni B, Rodriguez-Nieto S, Simon-Sanchez J, Fischer A, Craig DW, Neumann M, Bonn S, Rizzu P, Heutink P. Menden K, et al. Sci Data. 2023 Dec 1;10(1):849. doi: 10.1038/s41597-023-02598-x. Sci Data. 2023. PMID: 38040703 Free PMC article.
Pathogen detection in RNA-seq data with Pathonoia.
Liebhoff AM, Menden K, Laschtowitz A, Franke A, Schramm C, Bonn S. Liebhoff AM, et al. Among authors: menden k. BMC Bioinformatics. 2023 Feb 17;24(1):53. doi: 10.1186/s12859-023-05144-z. BMC Bioinformatics. 2023. PMID: 36803415 Free PMC article.
mlf-core: a framework for deterministic machine learning.
Heumos L, Ehmele P, Kuhn Cuellar L, Menden K, Miller E, Lemke S, Gabernet G, Nahnsen S. Heumos L, et al. Among authors: menden k. Bioinformatics. 2023 Apr 3;39(4):btad164. doi: 10.1093/bioinformatics/btad164. Bioinformatics. 2023. PMID: 37004171 Free PMC article.