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Page 1
A roadmap for the functional annotation of protein families: a community perspective.
de Crécy-Lagard V, Amorin de Hegedus R, Arighi C, Babor J, Bateman A, Blaby I, Blaby-Haas C, Bridge AJ, Burley SK, Cleveland S, Colwell LJ, Conesa A, Dallago C, Danchin A, de Waard A, Deutschbauer A, Dias R, Ding Y, Fang G, Friedberg I, Gerlt J, Goldford J, Gorelik M, Gyori BM, Henry C, Hutinet G, Jaroch M, Karp PD, Kondratova L, Lu Z, Marchler-Bauer A, Martin MJ, McWhite C, Moghe GD, Monaghan P, Morgat A, Mungall CJ, Natale DA, Nelson WC, O'Donoghue S, Orengo C, O'Toole KH, Radivojac P, Reed C, Roberts RJ, Rodionov D, Rodionova IA, Rudolf JD, Saleh L, Sheynkman G, Thibaud-Nissen F, Thomas PD, Uetz P, Vallenet D, Carter EW, Weigele PR, Wood V, Wood-Charlson EM, Xu J. de Crécy-Lagard V, et al. Among authors: deutschbauer a. Database (Oxford). 2022 Aug 12;2022:baac062. doi: 10.1093/database/baac062. Database (Oxford). 2022. PMID: 35961013 Free PMC article.
A weaponized phage suppresses competitors in historical and modern metapopulations of pathogenic bacteria.
Backman T, Latorre SM, Symeonidi E, Muszyński A, Bleak E, Eads L, Martinez-Koury PI, Som S, Hawks A, Gloss AD, Belnap DM, Manuel AM, Deutschbauer AM, Bergelson J, Azadi P, Burbano HA, Karasov TL. Backman T, et al. Among authors: deutschbauer am. bioRxiv [Preprint]. 2024 Feb 2:2023.04.17.536465. doi: 10.1101/2023.04.17.536465. bioRxiv. 2024. Update in: Science. 2024 Jun 14;384(6701):eado0713. doi: 10.1126/science.ado0713 PMID: 38352526 Free PMC article. Updated. Preprint.
The Epigenomic Landscape of Prokaryotes.
Blow MJ, Clark TA, Daum CG, Deutschbauer AM, Fomenkov A, Fries R, Froula J, Kang DD, Malmstrom RR, Morgan RD, Posfai J, Singh K, Visel A, Wetmore K, Zhao Z, Rubin EM, Korlach J, Pennacchio LA, Roberts RJ. Blow MJ, et al. Among authors: deutschbauer am. PLoS Genet. 2016 Feb 12;12(2):e1005854. doi: 10.1371/journal.pgen.1005854. eCollection 2016 Feb. PLoS Genet. 2016. PMID: 26870957 Free PMC article.
Mutant phenotypes for thousands of bacterial genes of unknown function.
Price MN, Wetmore KM, Waters RJ, Callaghan M, Ray J, Liu H, Kuehl JV, Melnyk RA, Lamson JS, Suh Y, Carlson HK, Esquivel Z, Sadeeshkumar H, Chakraborty R, Zane GM, Rubin BE, Wall JD, Visel A, Bristow J, Blow MJ, Arkin AP, Deutschbauer AM. Price MN, et al. Among authors: deutschbauer am. Nature. 2018 May;557(7706):503-509. doi: 10.1038/s41586-018-0124-0. Epub 2018 May 16. Nature. 2018. PMID: 29769716
GermOnline, a cross-species community knowledgebase on germ cell differentiation.
Wiederkehr C, Basavaraj R, Sarrauste de Menthière C, Hermida L, Koch R, Schlecht U, Amon A, Brachat S, Breitenbach M, Briza P, Caburet S, Cherry M, Davis R, Deutschbauer A, Dickinson HG, Dumitrescu T, Fellous M, Goldman A, Grootegoed JA, Hawley R, Ishii R, Jégou B, Kaufman RJ, Klein F, Lamb N, Maro B, Nasmyth K, Nicolas A, Orr-Weaver T, Philippsen P, Pineau C, Rabitsch KP, Reinke V, Roest H, Saunders W, Schröder M, Schedl T, Siep M, Villeneuve A, Wolgemuth DJ, Yamamoto M, Zickler D, Esposito RE, Primig M. Wiederkehr C, et al. Among authors: deutschbauer a. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D560-7. doi: 10.1093/nar/gkh055. Nucleic Acids Res. 2004. PMID: 14681481 Free PMC article.
Genomics for environmental microbiology.
Deutschbauer AM, Chivian D, Arkin AP. Deutschbauer AM, et al. Curr Opin Biotechnol. 2006 Jun;17(3):229-35. doi: 10.1016/j.copbio.2006.04.003. Epub 2006 May 2. Curr Opin Biotechnol. 2006. PMID: 16650754 Review.
An evaluation of high-throughput approaches to QTL mapping in Saccharomyces cerevisiae.
Wilkening S, Lin G, Fritsch ES, Tekkedil MM, Anders S, Kuehn R, Nguyen M, Aiyar RS, Proctor M, Sakhanenko NA, Galas DJ, Gagneur J, Deutschbauer A, Steinmetz LM. Wilkening S, et al. Among authors: deutschbauer a. Genetics. 2014 Mar;196(3):853-65. doi: 10.1534/genetics.113.160291. Epub 2013 Dec 27. Genetics. 2014. PMID: 24374355 Free PMC article.
139 results