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Page 1
Inferring gene regulation from stochastic transcriptional variation across single cells at steady state.
Gupta A, Martin-Rufino JD, Jones TR, Subramanian V, Qiu X, Grody EI, Bloemendal A, Weng C, Niu SY, Min KH, Mehta A, Zhang K, Siraj L, Al' Khafaji A, Sankaran VG, Raychaudhuri S, Cleary B, Grossman S, Lander ES. Gupta A, et al. Among authors: siraj l. Proc Natl Acad Sci U S A. 2022 Aug 23;119(34):e2207392119. doi: 10.1073/pnas.2207392119. Epub 2022 Aug 15. Proc Natl Acad Sci U S A. 2022. PMID: 35969771 Free PMC article.
Compatibility rules of human enhancer and promoter sequences.
Bergman DT, Jones TR, Liu V, Ray J, Jagoda E, Siraj L, Kang HY, Nasser J, Kane M, Rios A, Nguyen TH, Grossman SR, Fulco CP, Lander ES, Engreitz JM. Bergman DT, et al. Among authors: siraj l. Nature. 2022 Jul;607(7917):176-184. doi: 10.1038/s41586-022-04877-w. Epub 2022 May 20. Nature. 2022. PMID: 35594906 Free PMC article.
Feeding intolerance in critically ill patients with COVID-19.
Liu R, Paz M, Siraj L, Boyd T, Salamone S, Lite TV, Leung KM, Chirinos JD, Shang HH, Townsend MJ, Rho J, Ni P, Ranganath K, Violante AD, Zhao Z, Silvernale C, Ahmad I, Krasnow NA, Barnett ES, Harisinghani M, Kuo B, Black KE, Staller K. Liu R, et al. Among authors: siraj l. Clin Nutr. 2022 Dec;41(12):3069-3076. doi: 10.1016/j.clnu.2021.03.033. Epub 2021 Mar 29. Clin Nutr. 2022. PMID: 33934924 Free PMC article.
Functional dissection of complex and molecular trait variants at single nucleotide resolution.
Siraj L, Castro RI, Dewey H, Kales S, Nguyen TTL, Kanai M, Berenzy D, Mouri K, Wang QS, McCaw ZR, Gosai SJ, Aguet F, Cui R, Vockley CM, Lareau CA, Okada Y, Gusev A, Jones TR, Lander ES, Sabeti PC, Finucane HK, Reilly SK, Ulirsch JC, Tewhey R. Siraj L, et al. bioRxiv [Preprint]. 2024 May 6:2024.05.05.592437. doi: 10.1101/2024.05.05.592437. bioRxiv. 2024. PMID: 38766054 Free PMC article. Preprint.
Can We Use Artificial Intelligence Cluster Analysis to Identify Patients with Metastatic Breast Cancer to the Spine at Highest Risk of Postoperative Adverse Events?
Fourman MS, Siraj L, Duvall J, Ramsey DC, De La Garza Ramos R, Hadzipasic M, Connolly I, Williamson T, Shankar GM, Schoenfeld A, Yassari R, Massaad E, Shin JH. Fourman MS, et al. Among authors: siraj l. World Neurosurg. 2023 Jun;174:e26-e34. doi: 10.1016/j.wneu.2023.02.064. Epub 2023 Feb 18. World Neurosurg. 2023. PMID: 36805503 Free article.