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Crowdsourced benchmarking of taxonomic metagenome profilers: lessons learned from the sbv IMPROVER Microbiomics challenge.
Poussin C, Khachatryan L, Sierro N, Narsapuram VK, Meyer F, Kaikala V, Chawla V, Muppirala U, Kumar S, Belcastro V, Battey JND, Scotti E, Boué S, McHardy AC, Peitsch MC, Ivanov NV, Hoeng J. Poussin C, et al. Among authors: muppirala u. BMC Genomics. 2022 Aug 30;23(1):624. doi: 10.1186/s12864-022-08803-2. BMC Genomics. 2022. PMID: 36042406 Free PMC article.
Correction: The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes.
Masonbrink R, Maier TR, Muppirala U, Seetharam AS, Lord E, Juvale PS, Schmutz J, Johnson NT, Korkin D, Mitchum MG, Mimee B, den Akker SE, Hudson M, Severin AJ, Baum TJ. Masonbrink R, et al. Among authors: muppirala u. BMC Genomics. 2024 May 31;25(1):537. doi: 10.1186/s12864-024-10466-0. BMC Genomics. 2024. PMID: 38822236 Free PMC article. No abstract available.
The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes.
Masonbrink R, Maier TR, Muppirala U, Seetharam AS, Lord E, Juvale PS, Schmutz J, Johnson NT, Korkin D, Mitchum MG, Mimee B, den Akker SE, Hudson M, Severin AJ, Baum TJ. Masonbrink R, et al. Among authors: muppirala u. BMC Genomics. 2019 Feb 7;20(1):119. doi: 10.1186/s12864-019-5485-8. BMC Genomics. 2019. PMID: 30732586 Free PMC article.
Transcriptional analysis of phloem-associated cells of potato.
Lin T, Lashbrook CC, Cho SK, Butler NM, Sharma P, Muppirala U, Severin AJ, Hannapel DJ. Lin T, et al. Among authors: muppirala u. BMC Genomics. 2015 Sep 3;16(1):665. doi: 10.1186/s12864-015-1844-2. BMC Genomics. 2015. PMID: 26335434 Free PMC article.
Response to Persistent ER Stress in Plants: A Multiphasic Process That Transitions Cells from Prosurvival Activities to Cell Death.
Srivastava R, Li Z, Russo G, Tang J, Bi R, Muppirala U, Chudalayandi S, Severin A, He M, Vaitkevicius SI, Lawrence-Dill CJ, Liu P, Stapleton AE, Bassham DC, Brandizzi F, Howell SH. Srivastava R, et al. Among authors: muppirala u. Plant Cell. 2018 Jun;30(6):1220-1242. doi: 10.1105/tpc.18.00153. Epub 2018 May 25. Plant Cell. 2018. PMID: 29802214 Free PMC article.
16 results