Love MI - Search Results

1

Temporal analysis suggests a reciprocal relationship between 3D chromatin structure and transcription.

Reed KSM, Davis ES, Bond ML, Cabrera A, Thulson E, Quiroga IY, Cassel S, Woolery KT, Hilton I, Won H, Love MI, Phanstiel DH. Reed KSM, et al. Among authors: love mi. Cell Rep. 2022 Nov 1;41(5):111567. doi: 10.1016/j.celrep.2022.111567. Cell Rep. 2022. PMID: 36323252 Free PMC article.

2

Role of the chromatin landscape and sequence in determining cell type-specific genomic glucocorticoid receptor binding and gene regulation.

Love MI, Huska MR, Jurk M, Schöpflin R, Starick SR, Schwahn K, Cooper SB, Yamamoto KR, Thomas-Chollier M, Vingron M, Meijsing SH. Love MI, et al. Nucleic Acids Res. 2017 Feb 28;45(4):1805-1819. doi: 10.1093/nar/gkw1163. Nucleic Acids Res. 2017. PMID: 27903902 Free PMC article.

3

Static and Dynamic DNA Loops form AP-1-Bound Activation Hubs during Macrophage Development.

Phanstiel DH, Van Bortle K, Spacek D, Hess GT, Shamim MS, Machol I, Love MI, Aiden EL, Bassik MC, Snyder MP. Phanstiel DH, et al. Among authors: love mi. Mol Cell. 2017 Sep 21;67(6):1037-1048.e6. doi: 10.1016/j.molcel.2017.08.006. Epub 2017 Sep 7. Mol Cell. 2017. PMID: 28890333 Free PMC article.

4

Chromatin accessibility and gene expression during adipocyte differentiation identify context-dependent effects at cardiometabolic GWAS loci.

Perrin HJ, Currin KW, Vadlamudi S, Pandey GK, Ng KK, Wabitsch M, Laakso M, Love MI, Mohlke KL. Perrin HJ, et al. Among authors: love mi. PLoS Genet. 2021 Oct 26;17(10):e1009865. doi: 10.1371/journal.pgen.1009865. eCollection 2021 Oct. PLoS Genet. 2021. PMID: 34699533 Free PMC article.

5

Plotgardener: cultivating precise multi-panel figures in R.

Kramer NE, Davis ES, Wenger CD, Deoudes EM, Parker SM, Love MI, Phanstiel DH. Kramer NE, et al. Among authors: love mi. Bioinformatics. 2022 Mar 28;38(7):2042-2045. doi: 10.1093/bioinformatics/btac057. Bioinformatics. 2022. PMID: 35134826 Free PMC article.

6

Random allelic expression in the adult human body.

Kravitz SN, Ferris E, Love MI, Thomas A, Quinlan AR, Gregg C. Kravitz SN, et al. Among authors: love mi. Cell Rep. 2023 Jan 31;42(1):111945. doi: 10.1016/j.celrep.2022.111945. Epub 2023 Jan 5. Cell Rep. 2023. PMID: 36640362 Free PMC article.

7

CTCF: an R/bioconductor data package of human and mouse CTCF binding sites.

Dozmorov MG, Mu W, Davis ES, Lee S, Triche TJ Jr, Phanstiel DH, Love MI. Dozmorov MG, et al. Among authors: love mi. Bioinform Adv. 2022 Dec 16;2(1):vbac097. doi: 10.1093/bioadv/vbac097. eCollection 2022. Bioinform Adv. 2022. PMID: 36699364 Free PMC article.

8

Wnt activity reveals context-specific genetic effects on gene regulation in neural progenitors.

Matoba N, Le BD, Valone JM, Wolter JM, Mory J, Liang D, Aygün N, Broadaway KA, Bond ML, Mohlke KL, Zylka MJ, Love MI, Stein JL. Matoba N, et al. Among authors: love mi. bioRxiv [Preprint]. 2023 Apr 19:2023.02.07.527357. doi: 10.1101/2023.02.07.527357. bioRxiv. 2023. Update in: Nat Neurosci. 2024 Dec;27(12):2430-2442. doi: 10.1038/s41593-024-01773-6 PMID: 36798360 Free PMC article. Updated. Preprint.

9

bootRanges: flexible generation of null sets of genomic ranges for hypothesis testing.

Mu W, Davis ES, Lee S, Dozmorov MG, Phanstiel DH, Love MI. Mu W, et al. Among authors: love mi. Bioinformatics. 2023 May 4;39(5):btad190. doi: 10.1093/bioinformatics/btad190. Bioinformatics. 2023. PMID: 37042725 Free PMC article.

10

excluderanges: exclusion sets for T2T-CHM13, GRCm39, and other genome assemblies.

Ogata JD, Mu W, Davis ES, Xue B, Harrell JC, Sheffield NC, Phanstiel DH, Love MI, Dozmorov MG. Ogata JD, et al. Among authors: love mi. Bioinformatics. 2023 Apr 3;39(4):btad198. doi: 10.1093/bioinformatics/btad198. Bioinformatics. 2023. PMID: 37067481 Free PMC article.

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