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A distinct clade of Bifidobacterium longum in the gut of Bangladeshi children thrives during weaning.
Vatanen T, Ang QY, Siegwald L, Sarker SA, Le Roy CI, Duboux S, Delannoy-Bruno O, Ngom-Bru C, Boulangé CL, Stražar M, Avila-Pacheco J, Deik A, Pierce K, Bullock K, Dennis C, Sultana S, Sayed S, Rahman M, Ahmed T, Modesto M, Mattarelli P, Clish CB, Vlamakis H, Plichta DR, Sakwinska O, Xavier RJ. Vatanen T, et al. Among authors: strazar m. Cell. 2022 Nov 10;185(23):4280-4297.e12. doi: 10.1016/j.cell.2022.10.011. Epub 2022 Nov 1. Cell. 2022. PMID: 36323316 Free article.
Mobile genetic elements from the maternal microbiome shape infant gut microbial assembly and metabolism.
Vatanen T, Jabbar KS, Ruohtula T, Honkanen J, Avila-Pacheco J, Siljander H, Stražar M, Oikarinen S, Hyöty H, Ilonen J, Mitchell CM, Yassour M, Virtanen SM, Clish CB, Plichta DR, Vlamakis H, Knip M, Xavier RJ. Vatanen T, et al. Among authors: strazar m. Cell. 2022 Dec 22;185(26):4921-4936.e15. doi: 10.1016/j.cell.2022.11.023. Cell. 2022. PMID: 36563663 Free PMC article.
Spatial host-microbiome sequencing reveals niches in the mouse gut.
Lötstedt B, Stražar M, Xavier R, Regev A, Vickovic S. Lötstedt B, et al. Among authors: strazar m. Nat Biotechnol. 2024 Sep;42(9):1394-1403. doi: 10.1038/s41587-023-01988-1. Epub 2023 Nov 20. Nat Biotechnol. 2024. PMID: 37985876 Free PMC article.
Linking microbial genes to plasma and stool metabolites uncovers host-microbial interactions underlying ulcerative colitis disease course.
Schirmer M, Stražar M, Avila-Pacheco J, Rojas-Tapias DF, Brown EM, Temple E, Deik A, Bullock K, Jeanfavre S, Pierce K, Jin S, Invernizzi R, Pust MM, Costliow Z, Mack DR, Griffiths AM, Walters T, Boyle BM, Kugathasan S, Vlamakis H, Hyams J, Denson L, Clish CB, Xavier RJ. Schirmer M, et al. Among authors: strazar m. Cell Host Microbe. 2024 Feb 14;32(2):209-226.e7. doi: 10.1016/j.chom.2023.12.013. Epub 2024 Jan 11. Cell Host Microbe. 2024. PMID: 38215740
Gut microbiome and metabolome profiling in Framingham heart study reveals cholesterol-metabolizing bacteria.
Li C, Stražar M, Mohamed AMT, Pacheco JA, Walker RL, Lebar T, Zhao S, Lockart J, Dame A, Thurimella K, Jeanfavre S, Brown EM, Ang QY, Berdy B, Sergio D, Invernizzi R, Tinoco A, Pishchany G, Vasan RS, Balskus E, Huttenhower C, Vlamakis H, Clish C, Shaw SY, Plichta DR, Xavier RJ. Li C, et al. Among authors: strazar m. Cell. 2024 Apr 11;187(8):1834-1852.e19. doi: 10.1016/j.cell.2024.03.014. Epub 2024 Apr 2. Cell. 2024. PMID: 38569543
Commensal consortia decolonize Enterobacteriaceae via ecological control.
Furuichi M, Kawaguchi T, Pust MM, Yasuma-Mitobe K, Plichta DR, Hasegawa N, Ohya T, Bhattarai SK, Sasajima S, Aoto Y, Tuganbaev T, Yaginuma M, Ueda M, Okahashi N, Amafuji K, Kiridoshi Y, Sugita K, Stražar M, Avila-Pacheco J, Pierce K, Clish CB, Skelly AN, Hattori M, Nakamoto N, Caballero S, Norman JM, Olle B, Tanoue T, Suda W, Arita M, Bucci V, Atarashi K, Xavier RJ, Honda K. Furuichi M, et al. Among authors: strazar m. Nature. 2024 Sep;633(8031):878-886. doi: 10.1038/s41586-024-07960-6. Epub 2024 Sep 18. Nature. 2024. PMID: 39294375 Free PMC article.
Rationally-defined microbial consortia suppress multidrug-resistant proinflammatory Enterobacteriaceae via ecological control.
Honda K, Furuichi M, Kawaguchi T, Pust MM, Yasuma-Mitobe K, Plichta D, Hasegawa N, Ohya T, Bhattarai S, Sasajima S, Yoshimasa A, Tuganbaev T, Yaginuma M, Ueda M, Okahashi N, Amafuji K, Kiridooshi Y, Sugita K, Stražar M, Skelly A, Suda W, Hattori M, Nakamoto N, Caballero S, Norman J, Olle B, Tanoue T, Arita M, Bucci V, Atarashi K, Xavier R. Honda K, et al. Among authors: strazar m. Res Sq [Preprint]. 2023 Oct 23:rs.3.rs-3462622. doi: 10.21203/rs.3.rs-3462622/v1. Res Sq. 2023. Update in: Nature. 2024 Sep;633(8031):878-886. doi: 10.1038/s41586-024-07960-6. PMID: 37961431 Free PMC article. Updated. Preprint.
Removal of residues of psychoactive substances during wastewater treatment, their occurrence in receiving river waters and environmental risk assessment.
Verovšek T, Šuštarič A, Laimou-Geraniou M, Krizman-Matasic I, Prosen H, Eleršek T, Kramarič Zidar V, Mislej V, Mišmaš B, Stražar M, Levstek M, Cimrmančič B, Lukšič S, Uranjek N, Kozlovič-Bobič T, Kosjek T, Kocman D, Heath D, Heath E. Verovšek T, et al. Among authors: strazar m. Sci Total Environ. 2023 Mar 25;866:161257. doi: 10.1016/j.scitotenv.2022.161257. Epub 2023 Jan 4. Sci Total Environ. 2023. PMID: 36608822 Free article.
33 results