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Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies.
Talsania K, Shen TW, Chen X, Jaeger E, Li Z, Chen Z, Chen W, Tran B, Kusko R, Wang L, Pang AWC, Yang Z, Choudhari S, Colgan M, Fang LT, Carroll A, Shetty J, Kriga Y, German O, Smirnova T, Liu T, Li J, Kellman B, Hong K, Hastie AR, Natarajan A, Moshrefi A, Granat A, Truong T, Bombardi R, Mankinen V, Meerzaman D, Mason CE, Collins J, Stahlberg E, Xiao C, Wang C, Xiao W, Zhao Y. Talsania K, et al. Among authors: wang l, wang c. Genome Biol. 2022 Dec 13;23(1):255. doi: 10.1186/s13059-022-02816-6. Genome Biol. 2022. PMID: 36514120 Free PMC article.
Single-cell atlas of tumor cell evolution in response to therapy in hepatocellular carcinoma and intrahepatic cholangiocarcinoma.
Ma L, Wang L, Khatib SA, Chang CW, Heinrich S, Dominguez DA, Forgues M, Candia J, Hernandez MO, Kelly M, Zhao Y, Tran B, Hernandez JM, Davis JL, Kleiner DE, Wood BJ, Greten TF, Wang XW. Ma L, et al. Among authors: wang l, wang xw. J Hepatol. 2021 Dec;75(6):1397-1408. doi: 10.1016/j.jhep.2021.06.028. Epub 2021 Jun 30. J Hepatol. 2021. PMID: 34216724 Free PMC article.
Genome-wide profiling of transcription factor activity in primary liver cancer using single-cell ATAC sequencing.
Craig AJ, Silveira MAD, Ma L, Revsine M, Wang L, Heinrich S, Rae Z, Ruchinskas A, Dadkhah K, Do W, Behrens S, Mehrabadi FR, Dominguez DA, Forgues M, Budhu A, Chaisaingmongkol J, Hernandez JM, Davis JL, Tran B, Marquardt JU, Ruchirawat M, Kelly M, Greten TF, Wang XW. Craig AJ, et al. Among authors: wang l, wang xw. Cell Rep. 2023 Nov 28;42(11):113446. doi: 10.1016/j.celrep.2023.113446. Epub 2023 Nov 18. Cell Rep. 2023. PMID: 37980571 Free PMC article.
Lineage and ecology define liver tumor evolution in response to treatment.
Revsine M, Wang L, Forgues M, Behrens S, Craig AJ, Liu M, Tran B, Kelly M, Budhu A, Monge C, Xie C, Hernandez JM, Greten TF, Wang XW, Ma L. Revsine M, et al. Among authors: wang l, wang xw. Cell Rep Med. 2024 Feb 20;5(2):101394. doi: 10.1016/j.xcrm.2024.101394. Epub 2024 Jan 26. Cell Rep Med. 2024. PMID: 38280378 Free PMC article.
Serological responses to human virome define clinical outcomes of Italian patients infected with SARS-CoV-2.
Wang L, Candia J, Ma L, Zhao Y, Imberti L, Sottini A, Quiros-Roldan E, Dobbs K, Burbelo PD, Cohen JI, Delmonte OM, Forgues M, Liu H, Matthews HF, Shaw E, Stack MA, Weber SE, Zhang Y, Lisco A, Sereti I, Su HC, Notarangelo LD, Wang XW. Wang L, et al. Among authors: wang xw. Int J Biol Sci. 2022 Sep 1;18(15):5591-5606. doi: 10.7150/ijbs.78002. eCollection 2022. Int J Biol Sci. 2022. PMID: 36263161 Free PMC article.
Pan-viral serology uncovers distinct virome patterns as risk predictors of hepatocellular carcinoma and intrahepatic cholangiocarcinoma.
Do WL, Wang L, Forgues M, Liu J, Rabibhadana S, Pupacdi B, Zhao Y, Gholian H, Bhudhisawasdi V, Pairojkul C, Sukeepaisarnjaroen W, Pugkhem A, Luvira V, Lertprasertsuke N, Chotirosniramit A, Auewarakul CU, Ungtrakul T, Sricharunrat T, Sangrajrang S, Phornphutkul K, Budhu A, Harris CC, Mahidol C, Ruchirawat M, Wang XW. Do WL, et al. Among authors: wang l, wang xw. Cell Rep Med. 2023 Dec 19;4(12):101328. doi: 10.1016/j.xcrm.2023.101328. Cell Rep Med. 2023. PMID: 38118412 Free PMC article.
Multiregional single-cell dissection of tumor and immune cells reveals stable lock-and-key features in liver cancer.
Ma L, Heinrich S, Wang L, Keggenhoff FL, Khatib S, Forgues M, Kelly M, Hewitt SM, Saif A, Hernandez JM, Mabry D, Kloeckner R, Greten TF, Chaisaingmongkol J, Ruchirawat M, Marquardt JU, Wang XW. Ma L, et al. Among authors: wang l, wang xw. Nat Commun. 2022 Dec 7;13(1):7533. doi: 10.1038/s41467-022-35291-5. Nat Commun. 2022. PMID: 36476645 Free PMC article.
Serological Responses to Human Virome Define Clinical Outcomes of Italian Patients Infected with SARS-CoV-2.
Wang L, Candia J, Ma L, Zhao Y, Imberti L, Sottini A, Dobbs K; NIAID-NCI COVID Consortium; Lisco A, Sereti I, Su HC, Notarangelo LD, Wang XW. Wang L, et al. Among authors: wang xw. medRxiv [Preprint]. 2020 Sep 7:2020.09.04.20187088. doi: 10.1101/2020.09.04.20187088. medRxiv. 2020. Update in: Int J Biol Sci. 2022 Sep 1;18(15):5591-5606. doi: 10.7150/ijbs.78002 PMID: 32908997 Free PMC article. Updated. Preprint.
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