Sindi SS - Search Results

1

Modeling and Global Sensitivity Analysis of Strategies to Mitigate Covid-19 Transmission on a Structured College Campus.

Zhao L, Santiago F, Rutter EM, Khatri S, Sindi SS. Zhao L, et al. Among authors: sindi ss. Bull Math Biol. 2023 Jan 13;85(2):13. doi: 10.1007/s11538-022-01107-2. Bull Math Biol. 2023. PMID: 36637563 Free PMC article.

2

Structural Variant Prediction in Extended Pedigrees Through Sparse Negative Binomial Genome Signal Recovery.

Banuelos M, Sindi S, Marcia R. Banuelos M, et al. Annu Int Conf IEEE Eng Med Biol Soc. 2018 Jul;2018:1311-1314. doi: 10.1109/EMBC.2018.8512519. Annu Int Conf IEEE Eng Med Biol Soc. 2018. PMID: 30440632

3

An integrative probabilistic model for identification of structural variation in sequencing data.

Sindi SS, Onal S, Peng LC, Wu HT, Raphael BJ. Sindi SS, et al. Genome Biol. 2012;13(3):R22. doi: 10.1186/gb-2012-13-3-r22. Genome Biol. 2012. PMID: 22452995 Free PMC article.

4

Identification and frequency estimation of inversion polymorphisms from haplotype data.

Sindi SS, Raphael BJ. Sindi SS, et al. J Comput Biol. 2010 Mar;17(3):517-31. doi: 10.1089/cmb.2009.0185. J Comput Biol. 2010. PMID: 20377461

5

Prion dynamics and the quest for the genetic determinant in protein-only inheritance.

Sindi SS, Serio TR. Sindi SS, et al. Curr Opin Microbiol. 2009 Dec;12(6):623-30. doi: 10.1016/j.mib.2009.09.003. Epub 2009 Oct 26. Curr Opin Microbiol. 2009. PMID: 19864176 Free PMC article. Review.

6

A geometric approach for classification and comparison of structural variants.

Sindi S, Helman E, Bashir A, Raphael BJ. Sindi S, et al. Bioinformatics. 2009 Jun 15;25(12):i222-30. doi: 10.1093/bioinformatics/btp208. Bioinformatics. 2009. PMID: 19477992 Free PMC article.

7

A size threshold limits prion transmission and establishes phenotypic diversity.

Derdowski A, Sindi SS, Klaips CL, DiSalvo S, Serio TR. Derdowski A, et al. Among authors: sindi ss. Science. 2010 Oct 29;330(6004):680-3. doi: 10.1126/science.1197785. Science. 2010. PMID: 21030659 Free PMC article.

8

Integrated platform for manual and high-throughput statistical validation of tandem mass spectra.

Yu K, Sabelli A, DeKeukelaere L, Park R, Sindi S, Gatsonis CA, Salomon A. Yu K, et al. Proteomics. 2009 Jun;9(11):3115-25. doi: 10.1002/pmic.200800899. Proteomics. 2009. PMID: 19526561 Free PMC article.

9

Duplication count distributions in DNA sequences.

Sindi SS, Hunt BR, Yorke JA. Sindi SS, et al. Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Dec;78(6 Pt 1):061912. doi: 10.1103/PhysRevE.78.061912. Epub 2008 Dec 11. Phys Rev E Stat Nonlin Soft Matter Phys. 2008. PMID: 19256873 Free PMC article.

10

Constrained variant detection with SPaRC: Sparsity, parental relatedness, and coverage.

Banuelos M, Almanza R, Adhikari L, Marcia RF, Sindi S. Banuelos M, et al. Annu Int Conf IEEE Eng Med Biol Soc. 2016 Aug;2016:3490-3493. doi: 10.1109/EMBC.2016.7591480. Annu Int Conf IEEE Eng Med Biol Soc. 2016. PMID: 28269051

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