Fan K - Search Results

1

Multi-view graph convolutional network for cancer cell-specific synthetic lethality prediction.

Fan K, Tang S, Gökbağ B, Cheng L, Li L. Fan K, et al. Front Genet. 2023 Jan 9;13:1103092. doi: 10.3389/fgene.2022.1103092. eCollection 2022. Front Genet. 2023. PMID: 36699450 Free PMC article.

2

Essentiality and Transcriptome-Enriched Pathway Scores Predict Drug-Combination Synergy.

Li J, Huo Y, Wu X, Liu E, Zeng Z, Tian Z, Fan K, Stover D, Cheng L, Li L. Li J, et al. Among authors: fan k. Biology (Basel). 2020 Sep 7;9(9):278. doi: 10.3390/biology9090278. Biology (Basel). 2020. PMID: 32906805 Free PMC article.

3

Pseudo2GO: A Graph-Based Deep Learning Method for Pseudogene Function Prediction by Borrowing Information From Coding Genes.

Fan K, Zhang Y. Fan K, et al. Front Genet. 2020 Aug 18;11:807. doi: 10.3389/fgene.2020.00807. eCollection 2020. Front Genet. 2020. PMID: 33014009 Free PMC article.

4

Artificial intelligence and machine learning methods in predicting anti-cancer drug combination effects.

Fan K, Cheng L, Li L. Fan K, et al. Brief Bioinform. 2021 Nov 5;22(6):bbab271. doi: 10.1093/bib/bbab271. Brief Bioinform. 2021. PMID: 34347041 Free PMC article. Review.

5

Generation of dual-gRNA library for combinatorial CRISPR screening of synthetic lethal gene pairs.

Tang S, Wu X, Liu J, Zhang Q, Wang X, Shao S, Gokbag B, Fan K, Liu X, Li F, Cheng L, Li L. Tang S, et al. Among authors: fan k. STAR Protoc. 2022 Aug 24;3(3):101556. doi: 10.1016/j.xpro.2022.101556. eCollection 2022 Sep 16. STAR Protoc. 2022. PMID: 36060092 Free PMC article.

6

Synthetic lethal gene pairs: Experimental approaches and predictive models.

Tang S, Gökbağ B, Fan K, Shao S, Huo Y, Wu X, Cheng L, Li L. Tang S, et al. Among authors: fan k. Front Genet. 2022 Dec 1;13:961611. doi: 10.3389/fgene.2022.961611. eCollection 2022. Front Genet. 2022. PMID: 36531238 Free PMC article.

7

Multiple sampling schemes and deep learning improve active learning performance in drug-drug interaction information retrieval analysis from the literature.

Xie W, Fan K, Zhang S, Li L. Xie W, et al. Among authors: fan k. J Biomed Semantics. 2023 May 30;14(1):5. doi: 10.1186/s13326-023-00287-7. J Biomed Semantics. 2023. PMID: 37248476 Free PMC article.

8

SLKB: synthetic lethality knowledge base.

Gökbağ B, Tang S, Fan K, Cheng L, Yu L, Zhao Y, Li L. Gökbağ B, et al. Among authors: fan k. Nucleic Acids Res. 2024 Jan 5;52(D1):D1418-D1428. doi: 10.1093/nar/gkad806. Nucleic Acids Res. 2024. PMID: 37889037 Free PMC article.

9

Synthetic lethal connectivity and graph transformer improve synthetic lethality prediction.

Fan K, Gökbağ B, Tang S, Li S, Huang Y, Wang L, Cheng L, Li L. Fan K, et al. Brief Bioinform. 2024 Jul 25;25(5):bbae425. doi: 10.1093/bib/bbae425. Brief Bioinform. 2024. PMID: 39210507 Free PMC article.

10

Graph-based prediction of Protein-protein interactions with attributed signed graph embedding.

Yang F, Fan K, Song D, Lin H. Yang F, et al. Among authors: fan k. BMC Bioinformatics. 2020 Jul 21;21(1):323. doi: 10.1186/s12859-020-03646-8. BMC Bioinformatics. 2020. PMID: 32693790 Free PMC article.

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