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SWIFT clustering analysis of intracellular cytokine staining flow cytometry data of the HVTN 105 vaccine trial reveals high frequencies of HIV-specific CD4+ T cell responses and associations with humoral responses.
Mosmann TR, Rebhahn JA, De Rosa SC, Keefer MC, McElrath MJ, Rouphael NG, Pantaleo G, Gilbert PB, Corey L, Kobie JJ, Thakar J. Mosmann TR, et al. Among authors: thakar j. Front Immunol. 2024 Jun 6;15:1347926. doi: 10.3389/fimmu.2024.1347926. eCollection 2024. Front Immunol. 2024. PMID: 38903517 Free PMC article.
Immune digital twins for complex human pathologies: applications, limitations, and challenges.
Niarakis A, Laubenbacher R, An G, Ilan Y, Fisher J, Flobak Å, Reiche K, Rodríguez Martínez M, Geris L, Ladeira L, Veschini L, Blinov ML, Messina F, Fonseca LL, Ferreira S, Montagud A, Noël V, Marku M, Tsirvouli E, Torres MM, Harris LA, Sego TJ, Cockrell C, Shick AE, Balci H, Salazar A, Rian K, Hemedan AA, Esteban-Medina M, Staumont B, Hernandez-Vargas E, Martis B S, Madrid-Valiente A, Karampelesis P, Sordo Vieira L, Harlapur P, Kulesza A, Nikaein N, Garira W, Malik Sheriff RS, Thakar J, Tran VDT, Carbonell-Caballero J, Safaei S, Valencia A, Zinovyev A, Glazier JA. Niarakis A, et al. Among authors: thakar j. NPJ Syst Biol Appl. 2024 Nov 30;10(1):141. doi: 10.1038/s41540-024-00450-5. NPJ Syst Biol Appl. 2024. PMID: 39616158 Free PMC article. Review.
Clonal associations between lymphocyte subsets and functional states in rheumatoid arthritis synovium.
Dunlap G, Wagner A, Meednu N, Wang R, Zhang F, Ekabe JC, Jonsson AH, Wei K, Sakaue S, Nathan A; Accelerating Medicines Partnership Program: Rheumatoid Arthritis and Systemic Lupus Erythematosus (AMP RA/SLE) Network; Bykerk VP, Donlin LT, Goodman SM, Firestein GS, Boyle DL, Holers VM, Moreland LW, Tabechian D, Pitzalis C, Filer A, Raychaudhuri S, Brenner MB, Thakar J, McDavid A, Rao DA, Anolik JH. Dunlap G, et al. Among authors: thakar j. Nat Commun. 2024 Jun 11;15(1):4991. doi: 10.1038/s41467-024-49186-0. Nat Commun. 2024. PMID: 38862501 Free PMC article.
121 results