Grüning B - Search Results

1

The Planemo toolkit for developing, deploying, and executing scientific data analyses in Galaxy and beyond.

Bray S, Chilton J, Bernt M, Soranzo N, van den Beek M, Batut B, Rasche H, Čech M, Cock PJA, Grüning B, Nekrutenko A. Bray S, et al. Among authors: gruning b. Genome Res. 2023 Feb;33(2):261-268. doi: 10.1101/gr.276963.122. Epub 2023 Feb 24. Genome Res. 2023. PMID: 36828587 Free PMC article.

2

High-resolution TADs reveal DNA sequences underlying genome organization in flies.

Ramírez F, Bhardwaj V, Arrigoni L, Lam KC, Grüning BA, Villaveces J, Habermann B, Akhtar A, Manke T. Ramírez F, et al. Among authors: gruning ba. Nat Commun. 2018 Jan 15;9(1):189. doi: 10.1038/s41467-017-02525-w. Nat Commun. 2018. PMID: 29335486 Free PMC article.

3

Combinatorial Omics Analysis Reveals Perturbed Lysosomal Homeostasis in Collagen VII-deficient Keratinocytes.

Thriene K, Grüning BA, Bornert O, Erxleben A, Leppert J, Athanasiou I, Weber E, Kiritsi D, Nyström A, Reinheckel T, Backofen R, Has C, Bruckner-Tuderman L, Dengjel J. Thriene K, et al. Mol Cell Proteomics. 2018 Apr;17(4):565-579. doi: 10.1074/mcp.RA117.000437. Epub 2018 Jan 11. Mol Cell Proteomics. 2018. PMID: 29326176 Free PMC article.

4

Impact of high platelet turnover on the platelet transcriptome: Results from platelet RNA-sequencing in patients with sepsis.

Nührenberg TG, Stöckle J, Marini F, Zurek M, Grüning BA, Benes V, Hein L, Neumann FJ, Stratz C, Cederqvist M, Hochholzer W. Nührenberg TG, et al. PLoS One. 2022 Jan 27;17(1):e0260222. doi: 10.1371/journal.pone.0260222. eCollection 2022. PLoS One. 2022. PMID: 35085240 Free PMC article.

5

Small-molecule conversion of toxic oligomers to nontoxic β-sheet-rich amyloid fibrils.

Bieschke J, Herbst M, Wiglenda T, Friedrich RP, Boeddrich A, Schiele F, Kleckers D, Lopez del Amo JM, Grüning BA, Wang Q, Schmidt MR, Lurz R, Anwyl R, Schnoegl S, Fändrich M, Frank RF, Reif B, Günther S, Walsh DM, Wanker EE. Bieschke J, et al. Among authors: gruning ba. Nat Chem Biol. 2011 Nov 20;8(1):93-101. doi: 10.1038/nchembio.719. Nat Chem Biol. 2011. PMID: 22101602

6

MicroRNA Profiling in Aqueous Humor of Individual Human Eyes by Next-Generation Sequencing.

Wecker T, Hoffmeier K, Plötner A, Grüning BA, Horres R, Backofen R, Reinhard T, Schlunck G. Wecker T, et al. Invest Ophthalmol Vis Sci. 2016 Apr;57(4):1706-13. doi: 10.1167/iovs.15-17828. Invest Ophthalmol Vis Sci. 2016. PMID: 27064390

7

Genome sequence of Streptomyces sp. strain Tü6071.

Erxleben A, Wunsch-Palasis J, Grüning BA, Luzhetska M, Bechthold A, Günther S. Erxleben A, et al. J Bacteriol. 2011 Aug;193(16):4278-9. doi: 10.1128/JB.00377-11. Epub 2011 Jun 24. J Bacteriol. 2011. PMID: 21705604 Free PMC article.

8

Echinocandin B biosynthesis: a biosynthetic cluster from Aspergillus nidulans NRRL 8112 and reassembly of the subclusters Ecd and Hty from Aspergillus pachycristatus NRRL 11440 reveals a single coherent gene cluster.

Hüttel W, Youssar L, Grüning BA, Günther S, Hugentobler KG. Hüttel W, et al. BMC Genomics. 2016 Aug 8;17:570. doi: 10.1186/s12864-016-2885-x. BMC Genomics. 2016. PMID: 27502607 Free PMC article.

9

A rigorous evaluation of optimal peptide targets for MS-based clinical diagnostics of Coronavirus Disease 2019 (COVID-19).

Rajczewski AT, Mehta S, Nguyen DDA, Grüning BA, Johnson JE, McGowan T, Griffin TJ, Jagtap PD. Rajczewski AT, et al. medRxiv [Preprint]. 2021 Mar 1:2021.02.09.21251427. doi: 10.1101/2021.02.09.21251427. medRxiv. 2021. Update in: Clin Proteomics. 2021 May 10;18(1):15. doi: 10.1186/s12014-021-09321-1 PMID: 33688669 Free PMC article. Updated. Preprint.

10

Bioconda: sustainable and comprehensive software distribution for the life sciences.

Grüning B, Dale R, Sjödin A, Chapman BA, Rowe J, Tomkins-Tinch CH, Valieris R, Köster J; Bioconda Team. Grüning B, et al. Nat Methods. 2018 Jul;15(7):475-476. doi: 10.1038/s41592-018-0046-7. Nat Methods. 2018. PMID: 29967506 Free PMC article. No abstract available.

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