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Discovering motifs that induce sequencing errors.
Allhoff M, Schönhuth A, Martin M, Costa IG, Rahmann S, Marschall T. Allhoff M, et al. Among authors: costa ig. BMC Bioinformatics. 2013;14 Suppl 5(Suppl 5):S1. doi: 10.1186/1471-2105-14-S5-S1. Epub 2013 Apr 10. BMC Bioinformatics. 2013. PMID: 23735080 Free PMC article.
Detecting differential peaks in ChIP-seq signals with ODIN.
Allhoff M, Seré K, Chauvistré H, Lin Q, Zenke M, Costa IG. Allhoff M, et al. Among authors: costa ig. Bioinformatics. 2014 Dec 15;30(24):3467-75. doi: 10.1093/bioinformatics/btu722. Epub 2014 Nov 3. Bioinformatics. 2014. PMID: 25371479
Detecting differential peaks in ChIP-seq signals with ODIN.
Allhoff M, Seré K, Chauvistré H, Lin Q, Zenke M, Costa IG. Allhoff M, et al. Among authors: costa ig. Bioinformatics. 2015 Mar 15;31(6):980. doi: 10.1093/bioinformatics/btv030. Epub 2015 Feb 11. Bioinformatics. 2015. PMID: 25673339 No abstract available.
Replicative senescence is associated with nuclear reorganization and with DNA methylation at specific transcription factor binding sites.
Hänzelmann S, Beier F, Gusmao EG, Koch CM, Hummel S, Charapitsa I, Joussen S, Benes V, Brümmendorf TH, Reid G, Costa IG, Wagner W. Hänzelmann S, et al. Among authors: costa ig. Clin Epigenetics. 2015 Mar 4;7(1):19. doi: 10.1186/s13148-015-0057-5. eCollection 2015. Clin Epigenetics. 2015. PMID: 25763115 Free PMC article.
153 results