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Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning: A retrospective multi-centric study.
Niehues JM, Quirke P, West NP, Grabsch HI, van Treeck M, Schirris Y, Veldhuizen GP, Hutchins GGA, Richman SD, Foersch S, Brinker TJ, Fukuoka J, Bychkov A, Uegami W, Truhn D, Brenner H, Brobeil A, Hoffmeister M, Kather JN. Niehues JM, et al. Among authors: quirke p. Cell Rep Med. 2023 Apr 18;4(4):100980. doi: 10.1016/j.xcrm.2023.100980. Epub 2023 Mar 22. Cell Rep Med. 2023. PMID: 36958327 Free PMC article.
Encrypted federated learning for secure decentralized collaboration in cancer image analysis.
Truhn D, Tayebi Arasteh S, Saldanha OL, Müller-Franzes G, Khader F, Quirke P, West NP, Gray R, Hutchins GGA, James JA, Loughrey MB, Salto-Tellez M, Brenner H, Brobeil A, Yuan T, Chang-Claude J, Hoffmeister M, Foersch S, Han T, Keil S, Schulze-Hagen M, Isfort P, Bruners P, Kaissis G, Kuhl C, Nebelung S, Kather JN. Truhn D, et al. Among authors: quirke p. Med Image Anal. 2024 Feb;92:103059. doi: 10.1016/j.media.2023.103059. Epub 2023 Dec 7. Med Image Anal. 2024. PMID: 38104402 Free PMC article.
Automated curation of large-scale cancer histopathology image datasets using deep learning.
Hilgers L, Ghaffari Laleh N, West NP, Westwood A, Hewitt KJ, Quirke P, Grabsch HI, Carrero ZI, Matthaei E, Loeffler CML, Brinker TJ, Yuan T, Brenner H, Brobeil A, Hoffmeister M, Kather JN. Hilgers L, et al. Among authors: quirke p. Histopathology. 2024 Jun;84(7):1139-1153. doi: 10.1111/his.15159. Epub 2024 Feb 26. Histopathology. 2024. PMID: 38409878
Neo-adjuvant FOLFOX with and without panitumumab for patients with KRAS-wt locally advanced colon cancer: results following an extended biomarker panel on the FOxTROT Trial embedded phase II population.
Seligmann JF, Morton D, Elliott F, Handley K, Gray R, Seymour M, Glimelius B, Magill L, Williams CJM, Quirke P, Bottomley D, Wood HM, Murakami K, Beggs AD, West NP; FOxTROT Collaborative Group. Seligmann JF, et al. Among authors: quirke p. Ann Oncol. 2025 Jan 11:S0923-7534(25)00002-X. doi: 10.1016/j.annonc.2024.12.013. Online ahead of print. Ann Oncol. 2025. PMID: 39805350 Free article.
454 results