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Coupling microdroplet-based sample preparation, multiplexed isobaric labeling, and nanoflow peptide fractionation for deep proteome profiling of tissue microenvironment.
Veličković M, Fillmore TL, Attah K, Posso C, Pino JC, Zhao R, Williams SM, Veličković D, Jacobs JM, Burnum-Johnson KE, Zhu Y, Piehowski PD. Veličković M, et al. Among authors: zhao r. bioRxiv [Preprint]. 2023 Mar 13:2023.03.13.531822. doi: 10.1101/2023.03.13.531822. bioRxiv. 2023. Update in: Anal Chem. 2024 Aug 13;96(32):12973-12982. doi: 10.1021/acs.analchem.4c00523 PMID: 36993277 Free PMC article. Updated. Preprint.
Robust collection and processing for label-free single voxel proteomics.
Kitata RB, Velickovic M, Xu Z, Zhao R, Scholten D, Chu RK, Orton DJ, Chrisler WB, Mathews JV, Piehowski PD, Liu T, Smith RD, Liu H, Wasserfall CH, Tsai CF, Shi T. Kitata RB, et al. Among authors: zhao r. bioRxiv [Preprint]. 2023 Aug 15:2023.08.14.553333. doi: 10.1101/2023.08.14.553333. bioRxiv. 2023. PMID: 37645907 Free PMC article. Preprint.
Airway basal stem cells are necessary for the maintenance of functional intraepithelial airway macrophages.
Kooistra T, Saez B, Roche M, Egea-Zorrilla A, Li D, Anketell D, Nguyen N, Villoria J, Gillis J, Petri E, Vera L, Blasco-Iturri Z, Smith NP, Alladina J, Zhang Y, Vinarsky V, Shivaraju M, Sheng SL, Gonzalez-Celeiro M, Mou H, Waghray A, Lin B, Paksa A, Yanger K, Tata PR, Zhao R, Causton B, Zulueta JJ, Prosper F, Cho JL, Villani AC, Haber A, Rajagopal J, Medoff BD, Pardo-Saganta A. Kooistra T, et al. Among authors: zhao r. bioRxiv [Preprint]. 2024 Jun 26:2024.06.25.600501. doi: 10.1101/2024.06.25.600501. bioRxiv. 2024. PMID: 38979172 Free PMC article. Preprint.
Axo-axonic synaptic input drives homeostatic plasticity by tuning the axon initial segment structurally and functionally.
Zhao R, Ren B, Xiao Y, Tian J, Zou Y, Wei J, Qi Y, Hu A, Xie X, Huang ZJ, Shu Y, He M, Lu J, Tai Y. Zhao R, et al. bioRxiv [Preprint]. 2024 Jun 5:2024.04.11.589005. doi: 10.1101/2024.04.11.589005. bioRxiv. 2024. Update in: Sci Adv. 2024 Aug 2;10(31):eadk4331. doi: 10.1126/sciadv.adk4331 PMID: 38659885 Free PMC article. Updated. Preprint.
Selected humanization of yeast U1 snRNP leads to global suppression of pre-mRNA splicing and mitochondrial dysfunction in the budding yeast.
Chalivendra S, Shi S, Li X, Kuang Z, Giovinazzo J, Zhang L, Rossi J, Saviola AJ, Wang J, Welty R, Liu S, Vaeth K, Zhou ZH, Hansen KC, Taliaferro JM, Zhao R. Chalivendra S, et al. Among authors: zhao r. bioRxiv [Preprint]. 2023 Dec 15:2023.12.15.571893. doi: 10.1101/2023.12.15.571893. bioRxiv. 2023. Update in: RNA. 2024 Jul 16;30(8):1070-1088. doi: 10.1261/rna.079917.123 PMID: 38168357 Free PMC article. Updated. Preprint.
SASH1 interacts with TNKS2 and promotes human melanocyte stem cell maintenance.
Lambert KA, Clements CM, Mukherjee N, Pacheco TR, Shellman SX, Henen MA, Vögeli B, Goldstein NB, Birlea S, Hintzsche J, Tan AC, Zhao R, Norris DA, Robinson WA, Wang Y, VanTreeck JG, Shellman YG. Lambert KA, et al. Among authors: zhao r. bioRxiv [Preprint]. 2023 Sep 27:2023.09.26.559624. doi: 10.1101/2023.09.26.559624. bioRxiv. 2023. PMID: 37808724 Free PMC article. Preprint.
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