Huang D - Search Results

1

Systematic fine-mapping and functional studies of prostate cancer risk variants.

Qian Y, Wang J, Wang B, Wang W, Li P, Zhao Z, Jiang Y, Ren H, Huang D, Yang Y, Zhao Z, Zhang L, Shi J, Li MJ, Lu W. Qian Y, et al. Among authors: huang d. iScience. 2023 Mar 25;26(4):106497. doi: 10.1016/j.isci.2023.106497. eCollection 2023 Apr 21. iScience. 2023. PMID: 37096036 Free PMC article.

2

cepip: context-dependent epigenomic weighting for prioritization of regulatory variants and disease-associated genes.

Li MJ, Li M, Liu Z, Yan B, Pan Z, Huang D, Liang Q, Ying D, Xu F, Yao H, Wang P, Kocher JA, Xia Z, Sham PC, Liu JS, Wang J. Li MJ, et al. Among authors: huang d. Genome Biol. 2017 Mar 16;18(1):52. doi: 10.1186/s13059-017-1177-3. Genome Biol. 2017. PMID: 28302177 Free PMC article.

3

mTCTScan: a comprehensive platform for annotation and prioritization of mutations affecting drug sensitivity in cancers.

Li MJ, Yao H, Huang D, Liu H, Liu Z, Xu H, Qin Y, Prinz J, Xia W, Wang P, Yan B, Tran NL, Kocher JP, Sham PC, Wang J. Li MJ, et al. Among authors: huang d. Nucleic Acids Res. 2017 Jul 3;45(W1):W215-W221. doi: 10.1093/nar/gkx400. Nucleic Acids Res. 2017. PMID: 28482068 Free PMC article.

4

GWAS4D: multidimensional analysis of context-specific regulatory variant for human complex diseases and traits.

Huang D, Yi X, Zhang S, Zheng Z, Wang P, Xuan C, Sham PC, Wang J, Li MJ. Huang D, et al. Nucleic Acids Res. 2018 Jul 2;46(W1):W114-W120. doi: 10.1093/nar/gky407. Nucleic Acids Res. 2018. PMID: 29771388 Free PMC article.

5

regBase: whole genome base-wise aggregation and functional prediction for human non-coding regulatory variants.

Zhang S, He Y, Liu H, Zhai H, Huang D, Yi X, Dong X, Wang Z, Zhao K, Zhou Y, Wang J, Yao H, Xu H, Yang Z, Sham PC, Chen K, Li MJ. Zhang S, et al. Among authors: huang d. Nucleic Acids Res. 2019 Dec 2;47(21):e134. doi: 10.1093/nar/gkz774. Nucleic Acids Res. 2019. PMID: 31511901 Free PMC article.

6

QTLbase: an integrative resource for quantitative trait loci across multiple human molecular phenotypes.

Zheng Z, Huang D, Wang J, Zhao K, Zhou Y, Guo Z, Zhai S, Xu H, Cui H, Yao H, Wang Z, Yi X, Zhang S, Sham PC, Li MJ. Zheng Z, et al. Among authors: huang d. Nucleic Acids Res. 2020 Jan 8;48(D1):D983-D991. doi: 10.1093/nar/gkz888. Nucleic Acids Res. 2020. PMID: 31598699 Free PMC article.

7

CAUSALdb: a database for disease/trait causal variants identified using summary statistics of genome-wide association studies.

Wang J, Huang D, Zhou Y, Yao H, Liu H, Zhai S, Wu C, Zheng Z, Zhao K, Wang Z, Yi X, Zhang S, Liu X, Liu Z, Chen K, Yu Y, Sham PC, Li MJ. Wang J, et al. Among authors: huang d. Nucleic Acids Res. 2020 Jan 8;48(D1):D807-D816. doi: 10.1093/nar/gkz1026. Nucleic Acids Res. 2020. PMID: 31691819 Free PMC article.

8

epiCOLOC: Integrating Large-Scale and Context-Dependent Epigenomics Features for Comprehensive Colocalization Analysis.

Zhou Y, Sun Y, Huang D, Li MJ. Zhou Y, et al. Among authors: huang d. Front Genet. 2020 Feb 12;11:53. doi: 10.3389/fgene.2020.00053. eCollection 2020. Front Genet. 2020. PMID: 32117461 Free PMC article.

9

Ultrafast and scalable variant annotation and prioritization with big functional genomics data.

Huang D, Yi X, Zhou Y, Yao H, Xu H, Wang J, Zhang S, Nong W, Wang P, Shi L, Xuan C, Li M, Wang J, Li W, Kwan HS, Sham PC, Wang K, Li MJ. Huang D, et al. Genome Res. 2020 Dec;30(12):1789-1801. doi: 10.1101/gr.267997.120. Epub 2020 Oct 15. Genome Res. 2020. PMID: 33060171 Free PMC article.

10

vSampler: fast and annotation-based matched variant sampling tool.

Huang D, Wang Z, Zhou Y, Liang Q, Sham PC, Yao H, Li MJ. Huang D, et al. Bioinformatics. 2021 Jul 27;37(13):1915-1917. doi: 10.1093/bioinformatics/btaa883. Bioinformatics. 2021. PMID: 33270826

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