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Page 1
MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice.
Manghi P, Blanco-Míguez A, Manara S, NabiNejad A, Cumbo F, Beghini F, Armanini F, Golzato D, Huang KD, Thomas AM, Piccinno G, Punčochář M, Zolfo M, Lesker TR, Bredon M, Planchais J, Glodt J, Valles-Colomer M, Koren O, Pasolli E, Asnicar F, Strowig T, Sokol H, Segata N. Manghi P, et al. Cell Rep. 2023 May 30;42(5):112464. doi: 10.1016/j.celrep.2023.112464. Epub 2023 May 3. Cell Rep. 2023. PMID: 37141097 Free PMC article.
Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population.
Manara S, Selma-Royo M, Huang KD, Asnicar F, Armanini F, Blanco-Miguez A, Cumbo F, Golzato D, Manghi P, Pinto F, Valles-Colomer M, Amoroso L, Corrias MV, Ponzoni M, Raffaetà R, Cabrera-Rubio R, Olcina M, Pasolli E, Collado MC, Segata N. Manara S, et al. Curr Biol. 2023 May 22;33(10):1939-1950.e4. doi: 10.1016/j.cub.2023.04.011. Epub 2023 Apr 27. Curr Biol. 2023. PMID: 37116481 Free PMC article.
Metabolomic and gut microbiome profiles across the spectrum of community-based COVID and non-COVID disease.
Österdahl MF, Whiston R, Sudre CH, Asnicar F, Cheetham NJ, Blanco Miguez A, Bowyer V, Antonelli M, Snell O, Dos Santos Canas L, Hu C, Wolf J, Menni C, Malim M, Hart D, Spector T, Berry S, Segata N, Doores K, Ourselin S, Duncan EL, Steves CJ. Österdahl MF, et al. Sci Rep. 2023 Jun 27;13(1):10407. doi: 10.1038/s41598-023-34598-7. Sci Rep. 2023. PMID: 37369825 Free PMC article.
Extension of the Segatella copri complex to 13 species with distinct large extrachromosomal elements and associations with host conditions.
Blanco-Míguez A, Gálvez EJC, Pasolli E, De Filippis F, Amend L, Huang KD, Manghi P, Lesker TR, Riedel T, Cova L, Punčochář M, Thomas AM, Valles-Colomer M, Schober I, Hitch TCA, Clavel T, Berry SE, Davies R, Wolf J, Spector TD, Overmann J, Tett A, Ercolini D, Segata N, Strowig T. Blanco-Míguez A, et al. Cell Host Microbe. 2023 Nov 8;31(11):1804-1819.e9. doi: 10.1016/j.chom.2023.09.013. Epub 2023 Oct 25. Cell Host Microbe. 2023. PMID: 37883976 Free PMC article.
Gut Microbiome Diversity and Composition Correlates With Time in the Therapeutic Range in Patients on Warfarin Treatment: A Pilot Study.
Agosti P, Kouraki A, Dionisi T, Addolorato G, D'Innocenzo L, Sorrentino S, De Maio F, De Candia E, Blanco-Miguez A, Bazzani D, Bonadiman A, Tonidandel G, Bolzan M, Gianniello F, Passamonti SM, Abbattista M, Valdes AM, Bucciarelli P, Peyvandi F, Menni C. Agosti P, et al. Among authors: blanco miguez a. Arterioscler Thromb Vasc Biol. 2024 Dec;44(12):2659-2661. doi: 10.1161/ATVBAHA.124.321490. Epub 2024 Oct 31. Arterioscler Thromb Vasc Biol. 2024. PMID: 39479767 Free PMC article. No abstract available.
Unexplored microbial diversity from 2,500 food metagenomes and links with the human microbiome.
Carlino N, Blanco-Míguez A, Punčochář M, Mengoni C, Pinto F, Tatti A, Manghi P, Armanini F, Avagliano M, Barcenilla C, Breselge S, Cabrera-Rubio R, Calvete-Torre I, Coakley M, Cobo-Díaz JF, De Filippis F, Dey H, Leech J, Klaassens ES, Knobloch S, O'Neil D, Quijada NM, Sabater C, Skírnisdóttir S, Valentino V, Walsh L; MASTER EU Consortium; Alvarez-Ordóñez A, Asnicar F, Fackelmann G, Heidrich V, Margolles A, Marteinsson VT, Rota Stabelli O, Wagner M, Ercolini D, Cotter PD, Segata N, Pasolli E. Carlino N, et al. Among authors: blanco miguez a. Cell. 2024 Oct 3;187(20):5775-5795.e15. doi: 10.1016/j.cell.2024.07.039. Epub 2024 Aug 29. Cell. 2024. PMID: 39214080 Free article.
Intestinal Blastocystis is linked to healthier diets and more favorable cardiometabolic outcomes in 56,989 individuals from 32 countries.
Piperni E, Nguyen LH, Manghi P, Kim H, Pasolli E, Andreu-Sánchez S, Arrè A, Bermingham KM, Blanco-Míguez A, Manara S, Valles-Colomer M, Bakker E, Busonero F, Davies R, Fiorillo E, Giordano F, Hadjigeorgiou G, Leeming ER, Lobina M, Masala M, Maschio A, McIver LJ, Pala M, Pitzalis M, Wolf J, Fu J, Zhernakova A, Cacciò SM, Cucca F, Berry SE, Ercolini D, Chan AT, Huttenhower C, Spector TD, Segata N, Asnicar F. Piperni E, et al. Among authors: blanco miguez a. Cell. 2024 Aug 22;187(17):4554-4570.e18. doi: 10.1016/j.cell.2024.06.018. Epub 2024 Jul 8. Cell. 2024. PMID: 38981480 Free article.
Microbial composition associated with biliary stents in patients undergoing pancreatic resection for cancer.
Blanco-Míguez A, Carloni S, Cardenas C, Dioguardi CC, Lambroia L, Capretti G, Nappo G, Fugazza A, Capogreco A, Armanini F, Asnicar F, Dubois L, Golzato D, Manghi P, Pinto F, Scuderi C, Casari E, Montorsi M, Anderloni A, Rescigno M, Repici A, Zerbi A, Peano C, Tamburini S, Rusconi R, Segata N. Blanco-Míguez A, et al. NPJ Biofilms Microbiomes. 2024 Mar 30;10(1):35. doi: 10.1038/s41522-024-00506-8. NPJ Biofilms Microbiomes. 2024. PMID: 38555334 Free PMC article. Review.
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche.
Zepeda-Rivera M, Minot SS, Bouzek H, Wu H, Blanco-Míguez A, Manghi P, Jones DS, LaCourse KD, Wu Y, McMahon EF, Park SN, Lim YK, Kempchinsky AG, Willis AD, Cotton SL, Yost SC, Sicinska E, Kook JK, Dewhirst FE, Segata N, Bullman S, Johnston CD. Zepeda-Rivera M, et al. Among authors: blanco miguez a. Nature. 2024 Apr;628(8007):424-432. doi: 10.1038/s41586-024-07182-w. Epub 2024 Mar 20. Nature. 2024. PMID: 38509359 Free PMC article.
Discovering and exploring the hidden diversity of human gut viruses using highly enriched virome samples.
Zolfo M, Silverj A, Blanco-Míguez A, Manghi P, Rota-Stabelli O, Heidrich V, Jensen J, Maharjan S, Franzosa E, Menni C, Visconti A, Pinto F, Ciciani M, Huttenhower C, Cereseto A, Asnicar F, Kitano H, Yamada T, Segata N. Zolfo M, et al. Among authors: blanco miguez a. bioRxiv [Preprint]. 2024 Feb 19:2024.02.19.580813. doi: 10.1101/2024.02.19.580813. bioRxiv. 2024. PMID: 38464031 Free PMC article. Preprint.
44 results