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Page 1
SyntenyViewer: a comparative genomics-driven translational research tool.
Flores R, Huneau C, Burlot L, Lainé M, Kimmel E, Pommier C, Alaux M, Adam-Blondon AF, Pont C, Quesneville H, Salse J. Flores R, et al. Among authors: adam blondon af. Database (Oxford). 2023 May 9;2023:baad027. doi: 10.1093/database/baad027. Database (Oxford). 2023. PMID: 37159239 Free PMC article.
The ELIXIR Biodiversity Community: Understanding short- and long-term changes in biodiversity.
Waterhouse RM, Adam-Blondon AF, Balech B, Barta E, Ying Shi Chua P, Di Cola V, Heil KF, Hughes GM, Jermiin LS, Kalaš M, Lanfear J, Pafilis E, Palagi PM, Papageorgiou AC, Paupério J, Psomopoulos F, Raes N, Burgin J, Gabaldón T. Waterhouse RM, et al. Among authors: adam blondon af. F1000Res. 2024 May 22;12:ELIXIR-499. doi: 10.12688/f1000research.133724.2. eCollection 2023. F1000Res. 2024. PMID: 38882711 Free PMC article.
Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR.
Waterhouse RM, Adam-Blondon AF, Agosti D, Baldrian P, Balech B, Corre E, Davey RP, Lantz H, Pesole G, Quast C, Glöckner FO, Raes N, Sandionigi A, Santamaria M, Addink W, Vohradsky J, Nunes-Jorge A, Willassen NP, Lanfear J. Waterhouse RM, et al. Among authors: adam blondon af. F1000Res. 2021 Dec 3;10:ELIXIR-1238. doi: 10.12688/f1000research.73825.2. eCollection 2021. F1000Res. 2021. PMID: 35999898 Free PMC article.
Grapevine and Wine Metabolomics-Based Guidelines for FAIR Data and Metadata Management.
Savoi S, Arapitsas P, Duchêne É, Nikolantonaki M, Ontañón I, Carlin S, Schwander F, Gougeon RD, Ferreira ACS, Theodoridis G, Töpfer R, Vrhovsek U, Adam-Blondon AF, Pezzotti M, Mattivi F. Savoi S, et al. Among authors: adam blondon af. Metabolites. 2021 Nov 3;11(11):757. doi: 10.3390/metabo11110757. Metabolites. 2021. PMID: 34822415 Free PMC article.
Enabling reusability of plant phenomic datasets with MIAPPE 1.1.
Papoutsoglou EA, Faria D, Arend D, Arnaud E, Athanasiadis IN, Chaves I, Coppens F, Cornut G, Costa BV, Ćwiek-Kupczyńska H, Droesbeke B, Finkers R, Gruden K, Junker A, King GJ, Krajewski P, Lange M, Laporte MA, Michotey C, Oppermann M, Ostler R, Poorter H, Ramı Rez-Gonzalez R, Ramšak Ž, Reif JC, Rocca-Serra P, Sansone SA, Scholz U, Tardieu F, Uauy C, Usadel B, Visser RGF, Weise S, Kersey PJ, Miguel CM, Adam-Blondon AF, Pommier C. Papoutsoglou EA, et al. Among authors: adam blondon af. New Phytol. 2020 Jul;227(1):260-273. doi: 10.1111/nph.16544. Epub 2020 Apr 25. New Phytol. 2020. PMID: 32171029 Free PMC article.
Palaeogenomic insights into the origins of French grapevine diversity.
Ramos-Madrigal J, Runge AKW, Bouby L, Lacombe T, Samaniego Castruita JA, Adam-Blondon AF, Figueiral I, Hallavant C, Martínez-Zapater JM, Schaal C, Töpfer R, Petersen B, Sicheritz-Pontén T, This P, Bacilieri R, Gilbert MTP, Wales N. Ramos-Madrigal J, et al. Among authors: adam blondon af. Nat Plants. 2019 Jun;5(6):595-603. doi: 10.1038/s41477-019-0437-5. Epub 2019 Jun 10. Nat Plants. 2019. PMID: 31182840
Applying FAIR Principles to Plant Phenotypic Data Management in GnpIS.
Pommier C, Michotey C, Cornut G, Roumet P, Duchêne E, Flores R, Lebreton A, Alaux M, Durand S, Kimmel E, Letellier T, Merceron G, Laine M, Guerche C, Loaec M, Steinbach D, Laporte MA, Arnaud E, Quesneville H, Adam-Blondon AF. Pommier C, et al. Among authors: adam blondon af. Plant Phenomics. 2019 Apr 30;2019:1671403. doi: 10.34133/2019/1671403. eCollection 2019. Plant Phenomics. 2019. PMID: 33313522 Free PMC article.
RepetDB: a unified resource for transposable element references.
Amselem J, Cornut G, Choisne N, Alaux M, Alfama-Depauw F, Jamilloux V, Maumus F, Letellier T, Luyten I, Pommier C, Adam-Blondon AF, Quesneville H. Amselem J, et al. Among authors: adam blondon af. Mob DNA. 2019 Jan 29;10:6. doi: 10.1186/s13100-019-0150-y. eCollection 2019. Mob DNA. 2019. PMID: 30719103 Free PMC article.
Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data.
Alaux M, Rogers J, Letellier T, Flores R, Alfama F, Pommier C, Mohellibi N, Durand S, Kimmel E, Michotey C, Guerche C, Loaec M, Lainé M, Steinbach D, Choulet F, Rimbert H, Leroy P, Guilhot N, Salse J, Feuillet C; International Wheat Genome Sequencing Consortium; Paux E, Eversole K, Adam-Blondon AF, Quesneville H. Alaux M, et al. Among authors: adam blondon af. Genome Biol. 2018 Aug 17;19(1):111. doi: 10.1186/s13059-018-1491-4. Genome Biol. 2018. PMID: 30115101 Free PMC article.
39 results