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Mycena genomes resolve the evolution of fungal bioluminescence.
Ke HM, Lee HH, Lin CI, Liu YC, Lu MR, Hsieh JA, Chang CC, Wu PH, Lu MJ, Li JY, Shang G, Lu RJ, Nagy LG, Chen PY, Kao HW, Tsai IJ. Ke HM, et al. Among authors: lu mj, lu rj, lu mr. Proc Natl Acad Sci U S A. 2020 Dec 8;117(49):31267-31277. doi: 10.1073/pnas.2010761117. Epub 2020 Nov 23. Proc Natl Acad Sci U S A. 2020. PMID: 33229585 Free PMC article.
Establishing an optimized ATAC-seq protocol for the maize.
Hsieh JA, Lin PY, Wang CT, Lee YJ, Chang P, Lu RJ, Chen PY, Wang CR. Hsieh JA, et al. Among authors: lu rj. Front Plant Sci. 2024 May 28;15:1370618. doi: 10.3389/fpls.2024.1370618. eCollection 2024. Front Plant Sci. 2024. PMID: 38863553 Free PMC article.
Differential chromatin accessibility and transcriptional dynamics define breast cancer subtypes and their lineages.
Iglesia MD, Jayasinghe RG, Chen S, Terekhanova NV, Herndon JM, Storrs E, Karpova A, Zhou DC, Naser Al Deen N, Shinkle AT, Lu RJ, Caravan W, Houston A, Zhao Y, Sato K, Lal P, Street C, Martins Rodrigues F, Southard-Smith AN, Targino da Costa ALN, Zhu H, Mo CK, Crowson L, Fulton RS, Wyczalkowski MA, Fronick CC, Fulton LA, Sun H, Davies SR, Appelbaum EL, Chasnoff SE, Carmody M, Brooks C, Liu R, Wendl MC, Oh C, Bender D, Cruchaga C, Harari O, Bredemeyer A, Lavine K, Bose R, Margenthaler J, Held JM, Achilefu S, Ademuyiwa F, Aft R, Ma C, Colditz GA, Ju T, Oh ST, Fitzpatrick J, Hwang ES, Shoghi KI, Chheda MG, Veis DJ, Chen F, Fields RC, Gillanders WE, Ding L. Iglesia MD, et al. Among authors: lu rj. Nat Cancer. 2024 Nov;5(11):1713-1736. doi: 10.1038/s43018-024-00773-6. Epub 2024 Oct 30. Nat Cancer. 2024. PMID: 39478117 Free PMC article.
Integrative multi-omic cancer profiling reveals DNA methylation patterns associated with therapeutic vulnerability and cell-of-origin.
Liang WW, Lu RJ, Jayasinghe RG, Foltz SM, Porta-Pardo E, Geffen Y, Wendl MC, Lazcano R, Kolodziejczak I, Song Y, Govindan A, Demicco EG, Li X, Li Y, Sethuraman S, Payne SH, Fenyö D, Rodriguez H, Wiznerowicz M, Shen H, Mani DR, Rodland KD, Lazar AJ, Robles AI, Ding L; Clinical Proteomic Tumor Analysis Consortium. Liang WW, et al. Among authors: lu rj. Cancer Cell. 2023 Sep 11;41(9):1567-1585.e7. doi: 10.1016/j.ccell.2023.07.013. Epub 2023 Aug 14. Cancer Cell. 2023. PMID: 37582362 Free PMC article.
87 results