Li L - Search Results

1

Revealing proteome-level functional redundancy in the human gut microbiome using ultra-deep metaproteomics.

Li L, Wang T, Ning Z, Zhang X, Butcher J, Serrana JM, Simopoulos CMA, Mayne J, Stintzi A, Mack DR, Liu YY, Figeys D. Li L, et al. Nat Commun. 2023 Jun 10;14(1):3428. doi: 10.1038/s41467-023-39149-2. Nat Commun. 2023. PMID: 37301875 Free PMC article.

2

Assessing the impact of protein extraction methods for human gut metaproteomics.

Zhang X, Li L, Mayne J, Ning Z, Stintzi A, Figeys D. Zhang X, et al. Among authors: li l. J Proteomics. 2018 May 30;180:120-127. doi: 10.1016/j.jprot.2017.07.001. Epub 2017 Jul 10. J Proteomics. 2018. PMID: 28705725

3

Proteomic and Metaproteomic Approaches to Understand Host-Microbe Interactions.

Starr AE, Deeke SA, Li L, Zhang X, Daoud R, Ryan J, Ning Z, Cheng K, Nguyen LVH, Abou-Samra E, Lavallée-Adam M, Figeys D. Starr AE, et al. Among authors: li l. Anal Chem. 2018 Jan 2;90(1):86-109. doi: 10.1021/acs.analchem.7b04340. Epub 2017 Nov 9. Anal Chem. 2018. PMID: 29061041 Free article. Review. No abstract available.

4

Evaluating in Vitro Culture Medium of Gut Microbiome with Orthogonal Experimental Design and a Metaproteomics Approach.

Li L, Zhang X, Ning Z, Mayne J, Moore JI, Butcher J, Chiang CK, Mack D, Stintzi A, Figeys D. Li L, et al. J Proteome Res. 2018 Jan 5;17(1):154-163. doi: 10.1021/acs.jproteome.7b00461. Epub 2017 Nov 22. J Proteome Res. 2018. PMID: 29130306

5

MetaLab: an automated pipeline for metaproteomic data analysis.

Cheng K, Ning Z, Zhang X, Li L, Liao B, Mayne J, Stintzi A, Figeys D. Cheng K, et al. Among authors: li l. Microbiome. 2017 Dec 2;5(1):157. doi: 10.1186/s40168-017-0375-2. Microbiome. 2017. PMID: 29197424 Free PMC article.

6

iMetaLab 1.0: a web platform for metaproteomics data analysis.

Liao B, Ning Z, Cheng K, Zhang X, Li L, Mayne J, Figeys D. Liao B, et al. Among authors: li l. Bioinformatics. 2018 Nov 15;34(22):3954-3956. doi: 10.1093/bioinformatics/bty466. Bioinformatics. 2018. PMID: 29912378

7

Metaproteomics reveals associations between microbiome and intestinal extracellular vesicle proteins in pediatric inflammatory bowel disease.

Zhang X, Deeke SA, Ning Z, Starr AE, Butcher J, Li J, Mayne J, Cheng K, Liao B, Li L, Singleton R, Mack D, Stintzi A, Figeys D. Zhang X, et al. Among authors: li j, li l. Nat Commun. 2018 Jul 20;9(1):2873. doi: 10.1038/s41467-018-05357-4. Nat Commun. 2018. PMID: 30030445 Free PMC article.

8

An in vitro model maintaining taxon-specific functional activities of the gut microbiome.

Li L, Abou-Samra E, Ning Z, Zhang X, Mayne J, Wang J, Cheng K, Walker K, Stintzi A, Figeys D. Li L, et al. Nat Commun. 2019 Sep 12;10(1):4146. doi: 10.1038/s41467-019-12087-8. Nat Commun. 2019. PMID: 31515476 Free PMC article.

9

Chemoenzymatic Method for Glycoproteomic N-Glycan Type Quantitation.

Li H, Li L, Cheng K, Ning Z, Mayne J, Zhang X, Walker K, Chen R, Twine S, Li J, Figeys D. Li H, et al. Among authors: li j, li l. Anal Chem. 2020 Jan 7;92(1):1618-1627. doi: 10.1021/acs.analchem.9b04937. Epub 2019 Dec 20. Anal Chem. 2020. PMID: 31809011

10

Advancing functional and translational microbiome research using meta-omics approaches.

Zhang X, Li L, Butcher J, Stintzi A, Figeys D. Zhang X, et al. Among authors: li l. Microbiome. 2019 Dec 6;7(1):154. doi: 10.1186/s40168-019-0767-6. Microbiome. 2019. PMID: 31810497 Free PMC article. Review.

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