Xue Z - Search Results

1

Selective binding of retrotransposons by ZFP352 facilitates the timely dissolution of totipotency network.

Li Z, Xu H, Li J, Xu X, Wang J, Wu D, Zhang J, Liu J, Xue Z, Zhan G, Tan BCP, Chen D, Chan YS, Ng HH, Liu W, Hsu CH, Zhang D, Shen Y, Liang H. Li Z, et al. Among authors: xue z. Nat Commun. 2023 Jun 20;14(1):3646. doi: 10.1038/s41467-023-39344-1. Nat Commun. 2023. PMID: 37339952 Free PMC article.

2

RAD: a web application to identify region associated differentially expressed genes.

Guo Y, Xue Z, Yuan R, Li JJ, Pastor WA, Liu W. Guo Y, et al. Among authors: xue z. Bioinformatics. 2021 Sep 9;37(17):2741-2743. doi: 10.1093/bioinformatics/btab075. Bioinformatics. 2021. PMID: 33532827

3

Identification of SRSF3 target mRNAs using inducible TRIBE.

Jin S, Xue Z, Zhang J, Wang Z, Zhang J, Chen D, Liu W, Lin J. Jin S, et al. Among authors: xue z. Biochem Biophys Res Commun. 2021 Nov 12;578:21-27. doi: 10.1016/j.bbrc.2021.09.019. Epub 2021 Sep 10. Biochem Biophys Res Commun. 2021. PMID: 34534741

4

Human reproduction is regulated by retrotransposons derived from ancient Hominidae-specific viral infections.

Xiang X, Tao Y, DiRusso J, Hsu FM, Zhang J, Xue Z, Pontis J, Trono D, Liu W, Clark AT. Xiang X, et al. Among authors: xue z. Nat Commun. 2022 Jan 24;13(1):463. doi: 10.1038/s41467-022-28105-1. Nat Commun. 2022. PMID: 35075135 Free PMC article.

5

CRISPR-TE: a web-based tool to generate single guide RNAs targeting transposable elements.

Guo Y, Xue Z, Gong M, Jin S, Wu X, Liu W. Guo Y, et al. Among authors: xue z. Mob DNA. 2024 Feb 1;15(1):3. doi: 10.1186/s13100-024-00313-0. Mob DNA. 2024. PMID: 38303094 Free PMC article.

6

Comprehensive assessment of mRNA isoform detection methods for long-read sequencing data.

Su Y, Yu Z, Jin S, Ai Z, Yuan R, Chen X, Xue Z, Guo Y, Chen D, Liang H, Liu Z, Liu W. Su Y, et al. Among authors: xue z. Nat Commun. 2024 May 10;15(1):3972. doi: 10.1038/s41467-024-48117-3. Nat Commun. 2024. PMID: 38730241 Free PMC article.

7

Integrative mapping of human CD8⁺ T cells in inflammation and cancer.

Xue Z, Wu L, Tian R, Gao B, Zhao Y, He B, Sun D, Zhao B, Li Y, Zhu K, Wang L, Yao J, Liu W, Lu L. Xue Z, et al. Nat Methods. 2024 Nov 29. doi: 10.1038/s41592-024-02530-0. Online ahead of print. Nat Methods. 2024. PMID: 39614111

8

huARdb: human Antigen Receptor database for interactive clonotype-transcriptome analysis at the single-cell level.

Wu L, Xue Z, Jin S, Zhang J, Guo Y, Bai Y, Jin X, Wang C, Wang L, Liu Z, Wang JQ, Lu L, Liu W. Wu L, et al. Among authors: xue z. Nucleic Acids Res. 2022 Jan 7;50(D1):D1244-D1254. doi: 10.1093/nar/gkab857. Nucleic Acids Res. 2022. PMID: 34606616 Free PMC article.

9

MSdb: An integrated expression atlas of human musculoskeletal system.

Tian R, Xue Z, Ruan D, Chen P, Xu Y, Dai C, Shen W, Ouyang H, Liu W, Lin J. Tian R, et al. Among authors: xue z. iScience. 2023 May 18;26(6):106933. doi: 10.1016/j.isci.2023.106933. eCollection 2023 Jun 16. iScience. 2023. PMID: 37378342 Free PMC article.

10

Evaluation of T Cell Receptor Construction Methods from scRNA-Seq Data.

Tian R, Yu Z, Xue Z, Wu J, Wu L, Cai S, Gao B, He B, Zhao Y, Yao J, Lu L, Liu W. Tian R, et al. Among authors: xue z. Genomics Proteomics Bioinformatics. 2024 Dec 12:qzae086. doi: 10.1093/gpbjnl/qzae086. Online ahead of print. Genomics Proteomics Bioinformatics. 2024. PMID: 39666949 Free article.

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