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The Rat Genome Database: Genetic, Genomic, and Phenotypic Data Across Multiple Species.
Laulederkind SJF, Hayman GT, Wang SJ, Kaldunski ML, Vedi M, Demos WM, Tutaj M, Smith JR, Lamers L, Gibson AC, Thorat K, Thota J, Tutaj MA, de Pons JL, Dwinell MR, Kwitek AE. Laulederkind SJF, et al. Among authors: de pons jl. Curr Protoc. 2023 Jun;3(6):e804. doi: 10.1002/cpz1.804. Curr Protoc. 2023. PMID: 37347557 Free PMC article. Review.
The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data.
Laulederkind SJ, Shimoyama M, Hayman GT, Lowry TF, Nigam R, Petri V, Smith JR, Wang SJ, de Pons J, Kowalski G, Liu W, Rood W, Munzenmaier DH, Dwinell MR, Twigger SN, Jacob HJ; RGD Team. Laulederkind SJ, et al. Database (Oxford). 2011 Feb 14;2011:bar002. doi: 10.1093/database/bar002. Print 2011. Database (Oxford). 2011. PMID: 21321022 Free PMC article.
Ontology searching and browsing at the Rat Genome Database.
Laulederkind SJ, Tutaj M, Shimoyama M, Hayman GT, Lowry TF, Nigam R, Petri V, Smith JR, Wang SJ, de Pons J, Dwinell MR, Jacob HJ. Laulederkind SJ, et al. Database (Oxford). 2012 Mar 20;2012:bas016. doi: 10.1093/database/bas016. Print 2012. Database (Oxford). 2012. PMID: 22434847 Free PMC article.
The Rat Genome Database 2013--data, tools and users.
Laulederkind SJ, Hayman GT, Wang SJ, Smith JR, Lowry TF, Nigam R, Petri V, de Pons J, Dwinell MR, Shimoyama M, Munzenmaier DH, Worthey EA, Jacob HJ. Laulederkind SJ, et al. Brief Bioinform. 2013 Jul;14(4):520-6. doi: 10.1093/bib/bbt007. Epub 2013 Feb 22. Brief Bioinform. 2013. PMID: 23434633 Free PMC article.
PhenoMiner: quantitative phenotype curation at the rat genome database.
Laulederkind SJ, Liu W, Smith JR, Hayman GT, Wang SJ, Nigam R, Petri V, Lowry TF, de Pons J, Dwinell MR, Shimoyama M. Laulederkind SJ, et al. Database (Oxford). 2013 Apr 19;2013:bat015. doi: 10.1093/database/bat015. Print 2013. Database (Oxford). 2013. PMID: 23603846 Free PMC article.
Rat Genome Database: a unique resource for rat, human, and mouse quantitative trait locus data.
Nigam R, Laulederkind SJ, Hayman GT, Smith JR, Wang SJ, Lowry TF, Petri V, De Pons J, Tutaj M, Liu W, Jayaraman P, Munzenmaier DH, Worthey EA, Dwinell MR, Shimoyama M, Jacob HJ. Nigam R, et al. Physiol Genomics. 2013 Sep 16;45(18):809-16. doi: 10.1152/physiolgenomics.00065.2013. Epub 2013 Jul 23. Physiol Genomics. 2013. PMID: 23881287 Free PMC article.
OntoMate: a text-mining tool aiding curation at the Rat Genome Database.
Liu W, Laulederkind SJ, Hayman GT, Wang SJ, Nigam R, Smith JR, De Pons J, Dwinell MR, Shimoyama M. Liu W, et al. Database (Oxford). 2015 Jan 25;2015:bau129. doi: 10.1093/database/bau129. Print 2015. Database (Oxford). 2015. PMID: 25619558 Free PMC article.
Exploring human disease using the Rat Genome Database.
Shimoyama M, Laulederkind SJ, De Pons J, Nigam R, Smith JR, Tutaj M, Petri V, Hayman GT, Wang SJ, Ghiasvand O, Thota J, Dwinell MR. Shimoyama M, et al. Dis Model Mech. 2016 Oct 1;9(10):1089-1095. doi: 10.1242/dmm.026021. Dis Model Mech. 2016. PMID: 27736745 Free PMC article. Review.
34 results