Singh NP - Search Results

1

TreeTerminus -creating transcript trees using inferential replicate counts.

Singh NP, Love MI, Patro R. Singh NP, et al. iScience. 2023 May 25;26(6):106961. doi: 10.1016/j.isci.2023.106961. eCollection 2023 Jun 16. iScience. 2023. PMID: 37378336 Free PMC article.

2

Fulgor: A fast and compact k-mer index for large-scale matching and color queries.

Fan J, Singh NP, Khan J, Pibiri GE, Patro R. Fan J, et al. Among authors: singh np. bioRxiv [Preprint]. 2023 May 20:2023.05.09.539895. doi: 10.1101/2023.05.09.539895. bioRxiv. 2023. Update in: Algorithms Mol Biol. 2024 Jan 22;19(1):3. doi: 10.1186/s13015-024-00251-9 PMID: 37214944 Free PMC article. Updated. Preprint.

3

SEESAW: detecting isoform-level allelic imbalance accounting for inferential uncertainty.

Wu EY, Singh NP, Choi K, Zakeri M, Vincent M, Churchill GA, Ackert-Bicknell CL, Patro R, Love MI. Wu EY, et al. Among authors: singh np. Genome Biol. 2023 Jul 12;24(1):165. doi: 10.1186/s13059-023-03003-x. Genome Biol. 2023. PMID: 37438847 Free PMC article.

4

Tree-based differential testing using inferential uncertainty for RNA-Seq.

Singh NP, Wu EY, Fan J, Love MI, Patro R. Singh NP, et al. bioRxiv [Preprint]. 2023 Dec 25:2023.12.25.573288. doi: 10.1101/2023.12.25.573288. bioRxiv. 2023. PMID: 38234739 Free PMC article. Preprint.

5

Fulgor: a fast and compact k-mer index for large-scale matching and color queries.

Fan J, Khan J, Singh NP, Pibiri GE, Patro R. Fan J, et al. Among authors: singh np. Algorithms Mol Biol. 2024 Jan 22;19(1):3. doi: 10.1186/s13015-024-00251-9. Algorithms Mol Biol. 2024. PMID: 38254124 Free PMC article.

6

Alevin-fry-atac enables rapid and memory frugal mapping of single-cell ATAC-seq data using virtual colors for accurate genomic pseudoalignment.

Singh NP, Khan J, Patro R. Singh NP, et al. bioRxiv [Preprint]. 2024 Dec 2:2024.11.27.625771. doi: 10.1101/2024.11.27.625771. bioRxiv. 2024. PMID: 39677745 Free PMC article. Preprint.

7

The C. elegans gonadal sheath Sh1 cells extend asymmetrically over a differentiating germ cell population in the proliferative zone.

Li X, Singh N, Miller C, Washington I, Sosseh B, Gordon KL. Li X, et al. Elife. 2022 Sep 12;11:e75497. doi: 10.7554/eLife.75497. Elife. 2022. PMID: 36094368 Free PMC article.

8

Additional analyses of stem catarrhine and hominoid dental morphology support Kapi ramnagarensis as a stem hylobatid.

Gilbert CC, Ortiz A, Pugh KD, Campisano CJ, Patel BA, Singh NP, Fleagle JG, Patnaik R. Gilbert CC, et al. Among authors: singh np. J Hum Evol. 2025 Jan 6;199:103628. doi: 10.1016/j.jhevol.2024.103628. Online ahead of print. J Hum Evol. 2025. PMID: 39764860

9

Co-circulation of dengue serotypes in East Delhi: A new threat.

Jain C, Sinha S, Shah A, Birhman N, Singh NP, Das S. Jain C, et al. Among authors: singh np. Med J Armed Forces India. 2024 Dec;80(Suppl 1):S395-S397. doi: 10.1016/j.mjafi.2023.05.002. Epub 2023 Jun 12. Med J Armed Forces India. 2024. PMID: 39734870 No abstract available.

10

Global, regional, and national progress towards the 2030 global nutrition targets and forecasts to 2050: a systematic analysis for the Global Burden of Disease Study 2021.

Global Nutrition Target Collaborators. Global Nutrition Target Collaborators. Lancet. 2025 Dec 21;404(10471):2543-2583. doi: 10.1016/S0140-6736(24)01821-X. Epub 2024 Dec 9. Lancet. 2025. PMID: 39667386 Free PMC article.

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