Zhao X - Search Results

1

Long-Read Sequencing Reveals Extensive DNA Methylations in Human Gut Phagenome Contributed by Prevalently Phage-Encoded Methyltransferases.

Sun C, Chen J, Jin M, Zhao X, Li Y, Dong Y, Gao N, Liu Z, Bork P, Zhao XM, Chen WH. Sun C, et al. Among authors: zhao x, zhao xm. Adv Sci (Weinh). 2023 Sep;10(25):e2302159. doi: 10.1002/advs.202302159. Epub 2023 Jun 29. Adv Sci (Weinh). 2023. PMID: 37382405 Free PMC article.

2

Drug discovery in the age of systems biology: the rise of computational approaches for data integration.

Iskar M, Zeller G, Zhao XM, van Noort V, Bork P. Iskar M, et al. Curr Opin Biotechnol. 2012 Aug;23(4):609-16. doi: 10.1016/j.copbio.2011.11.010. Epub 2011 Dec 5. Curr Opin Biotechnol. 2012. PMID: 22153034 Review.

3

Prediction of drug combinations by integrating molecular and pharmacological data.

Zhao XM, Iskar M, Zeller G, Kuhn M, van Noort V, Bork P. Zhao XM, et al. PLoS Comput Biol. 2011 Dec;7(12):e1002323. doi: 10.1371/journal.pcbi.1002323. Epub 2011 Dec 29. PLoS Comput Biol. 2011. PMID: 22219721 Free PMC article.

4

Human monogenic disease genes have frequently functionally redundant paralogs.

Chen WH, Zhao XM, van Noort V, Bork P. Chen WH, et al. PLoS Comput Biol. 2013;9(5):e1003073. doi: 10.1371/journal.pcbi.1003073. Epub 2013 May 16. PLoS Comput Biol. 2013. PMID: 23696728 Free PMC article.

5

Comments on "Human dominant disease genes are enriched in paralogs originating from whole genome duplication".

Chen WH, Zhao XM, van Noort V, Bork P. Chen WH, et al. PLoS Comput Biol. 2014 Jul 31;10(7):e1003758. doi: 10.1371/journal.pcbi.1003758. eCollection 2014 Jul. PLoS Comput Biol. 2014. PMID: 25077479 Free PMC article. No abstract available.

6

mBodyMap: a curated database for microbes across human body and their associations with health and diseases.

Jin H, Hu G, Sun C, Duan Y, Zhang Z, Liu Z, Zhao XM, Chen WH. Jin H, et al. Nucleic Acids Res. 2022 Jan 7;50(D1):D808-D816. doi: 10.1093/nar/gkab973. Nucleic Acids Res. 2022. PMID: 34718713 Free PMC article.

7

GMrepo v2: a curated human gut microbiome database with special focus on disease markers and cross-dataset comparison.

Dai D, Zhu J, Sun C, Li M, Liu J, Wu S, Ning K, He LJ, Zhao XM, Chen WH. Dai D, et al. Nucleic Acids Res. 2022 Jan 7;50(D1):D777-D784. doi: 10.1093/nar/gkab1019. Nucleic Acids Res. 2022. PMID: 34788838 Free PMC article.

8

metaMIC: reference-free misassembly identification and correction of de novo metagenomic assemblies.

Lai S, Pan S, Sun C, Coelho LP, Chen WH, Zhao XM. Lai S, et al. Genome Biol. 2022 Nov 14;23(1):242. doi: 10.1186/s13059-022-02810-y. Genome Biol. 2022. PMID: 36376928 Free PMC article.

9

A survey on computational strategies for genome-resolved gut metagenomics.

Jia L, Wu Y, Dong Y, Chen J, Chen WH, Zhao XM. Jia L, et al. Brief Bioinform. 2023 May 19;24(3):bbad162. doi: 10.1093/bib/bbad162. Brief Bioinform. 2023. PMID: 37114640

10

Performance of Gut Microbiome as an Independent Diagnostic Tool for 20 Diseases: Cross-Cohort Validation of Machine-Learning Classifiers.

Li M, Liu J, Zhu J, Wang H, Sun C, Gao NL, Zhao XM, Chen WH. Li M, et al. Gut Microbes. 2023 Jan-Dec;15(1):2205386. doi: 10.1080/19490976.2023.2205386. Gut Microbes. 2023. PMID: 37140125 Free PMC article.

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