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Page 1
Whole-brain annotation and multi-connectome cell typing quantifies circuit stereotypy in Drosophila.
Schlegel P, Yin Y, Bates AS, Dorkenwald S, Eichler K, Brooks P, Han DS, Gkantia M, Dos Santos M, Munnelly EJ, Badalamente G, Capdevila LS, Sane VA, Pleijzier MW, Tamimi IFM, Dunne CR, Salgarella I, Javier A, Fang S, Perlman E, Kazimiers T, Jagannathan SR, Matsliah A, Sterling AR, Yu SC, McKellar CE; FlyWire Consortium; Costa M, Seung HS, Murthy M, Hartenstein V, Bock DD, Jefferis GSXE. Schlegel P, et al. Among authors: sterling ar. bioRxiv [Preprint]. 2023 Jul 15:2023.06.27.546055. doi: 10.1101/2023.06.27.546055. bioRxiv. 2023. Update in: Nature. 2024 Oct;634(8032):139-152. doi: 10.1038/s41586-024-07686-5. PMID: 37425808 Free PMC article. Updated. Preprint.
FlyWire: online community for whole-brain connectomics.
Dorkenwald S, McKellar CE, Macrina T, Kemnitz N, Lee K, Lu R, Wu J, Popovych S, Mitchell E, Nehoran B, Jia Z, Bae JA, Mu S, Ih D, Castro M, Ogedengbe O, Halageri A, Kuehner K, Sterling AR, Ashwood Z, Zung J, Brittain D, Collman F, Schneider-Mizell C, Jordan C, Silversmith W, Baker C, Deutsch D, Encarnacion-Rivera L, Kumar S, Burke A, Bland D, Gager J, Hebditch J, Koolman S, Moore M, Morejohn S, Silverman B, Willie K, Willie R, Yu SC, Murthy M, Seung HS. Dorkenwald S, et al. Among authors: sterling ar. Nat Methods. 2022 Jan;19(1):119-128. doi: 10.1038/s41592-021-01330-0. Epub 2021 Dec 23. Nat Methods. 2022. PMID: 34949809 Free PMC article.
A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing.
Shiu PK, Sterne GR, Spiller N, Franconville R, Sandoval A, Zhou J, Simha N, Kang CH, Yu S, Kim JS, Dorkenwald S, Matsliah A, Schlegel P, Szi-Chieh Y, McKellar CE, Sterling A, Costa M, Eichler K, Jefferis GSXE, Murthy M, Bates AS, Eckstein N, Funke J, Bidaye SS, Hampel S, Seeds AM, Scott K. Shiu PK, et al. bioRxiv [Preprint]. 2023 May 2:2023.05.02.539144. doi: 10.1101/2023.05.02.539144. bioRxiv. 2023. Update in: Nature. 2024 Oct;634(8032):210-219. doi: 10.1038/s41586-024-07763-9. PMID: 37205514 Free PMC article. Updated. Preprint.
Neuronal wiring diagram of an adult brain.
Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, Kuehner K, Ogedengbe O, Morey R, Gager J, Kruk K, Perlman E, Yang R, Deutsch D, Bland D, Sorek M, Lu R, Macrina T, Lee K, Bae JA, Mu S, Nehoran B, Mitchell E, Popovych S, Wu J, Jia Z, Castro M, Kemnitz N, Ih D, Bates AS, Eckstein N, Funke J, Collman F, Bock DD, Jefferis GSXE, Seung HS, Murthy M; FlyWire Consortium. Dorkenwald S, et al. Among authors: sterling ar. bioRxiv [Preprint]. 2023 Jul 11:2023.06.27.546656. doi: 10.1101/2023.06.27.546656. bioRxiv. 2023. Update in: Nature. 2024 Oct;634(8032):124-138. doi: 10.1038/s41586-024-07558-y. PMID: 37425937 Free PMC article. Updated. Preprint.
Network Statistics of the Whole-Brain Connectome of Drosophila.
Lin A, Yang R, Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Costa M, Eichler K, Bates AS, Eckstein N, Funke J, Jefferis GSXE, Murthy M. Lin A, et al. Among authors: sterling ar. bioRxiv [Preprint]. 2024 Feb 28:2023.07.29.551086. doi: 10.1101/2023.07.29.551086. bioRxiv. 2024. Update in: Nature. 2024 Oct;634(8032):153-165. doi: 10.1038/s41586-024-07968-y. PMID: 37547019 Free PMC article. Updated. Preprint.
Neuronal "parts list" and wiring diagram for a visual system.
Matsliah A, Yu SC, Kruk K, Bland D, Burke A, Gager J, Hebditch J, Silverman B, Willie K, Willie RW, Sorek M, Sterling AR, Kind E, Garner D, Sancer G, Wernet MF, Kim SS, Murthy M, Seung HS; FlyWire Consortium. Matsliah A, et al. Among authors: sterling ar. bioRxiv [Preprint]. 2024 Apr 15:2023.10.12.562119. doi: 10.1101/2023.10.12.562119. bioRxiv. 2024. Update in: Nature. 2024 Oct;634(8032):166-180. doi: 10.1038/s41586-024-07981-1. PMID: 37873160 Free PMC article. Updated. Preprint.
From connectome to effectome: learning the causal interaction map of the fly brain.
Pospisil DA, Aragon MJ, Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Costa M, Eichler K, Jefferis GSXE, Murthy M, Pillow JW. Pospisil DA, et al. Among authors: sterling ar. bioRxiv [Preprint]. 2024 Feb 9:2023.10.31.564922. doi: 10.1101/2023.10.31.564922. bioRxiv. 2024. PMID: 37961285 Free PMC article. Preprint.
Neurotransmitter classification from electron microscopy images at synaptic sites in Drosophila melanogaster.
Eckstein N, Bates AS, Champion A, Du M, Yin Y, Schlegel P, Lu AK, Rymer T, Finley-May S, Paterson T, Parekh R, Dorkenwald S, Matsliah A, Yu SC, McKellar C, Sterling A, Eichler K, Costa M, Seung S, Murthy M, Hartenstein V, Jefferis GSXE, Funke J. Eckstein N, et al. Cell. 2024 May 9;187(10):2574-2594.e23. doi: 10.1016/j.cell.2024.03.016. Cell. 2024. PMID: 38729112 Free PMC article.
Comparative connectomics of the descending and ascending neurons of the Drosophila nervous system: stereotypy and sexual dimorphism.
Stürner T, Brooks P, Capdevila LS, Morris BJ, Javier A, Fang S, Gkantia M, Cachero S, Beckett IR, Champion AS, Moitra I, Richards A, Klemm F, Kugel L, Namiki S, Cheong HSJ, Kovalyak J, Tenshaw E, Parekh R, Schlegel P, Phelps JS, Mark B, Dorkenwald S, Bates AS, Matsliah A, Yu SC, McKellar CE, Sterling A, Seung S, Murthy M, Tuthill J, Lee WA, Card GM, Costa M, Jefferis GSXE, Eichler K. Stürner T, et al. bioRxiv [Preprint]. 2024 Jun 28:2024.06.04.596633. doi: 10.1101/2024.06.04.596633. bioRxiv. 2024. PMID: 38895426 Free PMC article. Preprint.
Network statistics of the whole-brain connectome of Drosophila.
Lin A, Yang R, Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Costa M, Eichler K, Bates AS, Eckstein N, Funke J, Jefferis GSXE, Murthy M. Lin A, et al. Among authors: sterling ar. Nature. 2024 Oct;634(8032):153-165. doi: 10.1038/s41586-024-07968-y. Epub 2024 Oct 2. Nature. 2024. PMID: 39358527 Free PMC article.
19 results