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Consistency across multi-omics layers in a drug-perturbed gut microbial community.
Wuyts S, Alves R, Zimmermann-Kogadeeva M, Nishijima S, Blasche S, Driessen M, Geyer PE, Hercog R, Kartal E, Maier L, Müller JB, Garcia Santamarina S, Schmidt TSB, Sevin DC, Telzerow A, Treit PV, Wenzel T, Typas A, Patil KR, Mann M, Kuhn M, Bork P. Wuyts S, et al. Among authors: bork p. Mol Syst Biol. 2023 Sep 12;19(9):e11525. doi: 10.15252/msb.202311525. Epub 2023 Jul 24. Mol Syst Biol. 2023. PMID: 37485738 Free PMC article.
STITCH: interaction networks of chemicals and proteins.
Kuhn M, von Mering C, Campillos M, Jensen LJ, Bork P. Kuhn M, et al. Among authors: bork p. Nucleic Acids Res. 2008 Jan;36(Database issue):D684-8. doi: 10.1093/nar/gkm795. Epub 2007 Dec 15. Nucleic Acids Res. 2008. PMID: 18084021 Free PMC article.
Large-scale prediction of drug-target relationships.
Kuhn M, Campillos M, González P, Jensen LJ, Bork P. Kuhn M, et al. Among authors: bork p. FEBS Lett. 2008 Apr 9;582(8):1283-90. doi: 10.1016/j.febslet.2008.02.024. Epub 2008 Feb 20. FEBS Lett. 2008. PMID: 18291108 Free article. Review.
Drug target identification using side-effect similarity.
Campillos M, Kuhn M, Gavin AC, Jensen LJ, Bork P. Campillos M, et al. Among authors: bork p. Science. 2008 Jul 11;321(5886):263-6. doi: 10.1126/science.1158140. Science. 2008. PMID: 18621671
A side effect resource to capture phenotypic effects of drugs.
Kuhn M, Campillos M, Letunic I, Jensen LJ, Bork P. Kuhn M, et al. Among authors: bork p. Mol Syst Biol. 2010;6:343. doi: 10.1038/msb.2009.98. Epub 2010 Jan 19. Mol Syst Biol. 2010. PMID: 20087340 Free PMC article.
Drug-induced regulation of target expression.
Iskar M, Campillos M, Kuhn M, Jensen LJ, van Noort V, Bork P. Iskar M, et al. Among authors: bork p. PLoS Comput Biol. 2010 Sep 9;6(9):e1000925. doi: 10.1371/journal.pcbi.1000925. PLoS Comput Biol. 2010. PMID: 20838579 Free PMC article.
A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae.
Gallego O, Betts MJ, Gvozdenovic-Jeremic J, Maeda K, Matetzki C, Aguilar-Gurrieri C, Beltran-Alvarez P, Bonn S, Fernández-Tornero C, Jensen LJ, Kuhn M, Trott J, Rybin V, Müller CW, Bork P, Kaksonen M, Russell RB, Gavin AC. Gallego O, et al. Among authors: bork p. Mol Syst Biol. 2010 Nov 30;6:430. doi: 10.1038/msb.2010.87. Mol Syst Biol. 2010. PMID: 21119626 Free PMC article.
697 results