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A postdoctoral training program in bioimage analysis.
Cimini BA, Tromans-Coia C, Stirling DR, Sivagurunathan S, Senft RA, Ryder PV, Miglietta E, Llanos P, Jamali N, Diaz-Rohrer B, Dasgupta S, Cruz M, Weisbart E, Carpenter AE. Cimini BA, et al. Among authors: weisbart e. Mol Biol Cell. 2024 Sep 1;35(9):pe2. doi: 10.1091/mbc.E24-05-0214. Mol Biol Cell. 2024. PMID: 39105698 Free PMC article. Review.
A Postdoctoral Training Program in Bioimage Analysis.
Cimini BA, Tromans-Coia C, Stirling D, Sivagurunathan S, Senft R, Ryder P, Miglietta E, Llanos P, Jamali N, Diaz-Rohrer B, Dasgupta S, Cruz M, Weisbart E, Carpenter AE. Cimini BA, et al. Among authors: weisbart e. bioRxiv [Preprint]. 2024 May 15:2024.05.13.593910. doi: 10.1101/2024.05.13.593910. bioRxiv. 2024. Update in: Mol Biol Cell. 2024 Sep 1;35(9):pe2. doi: 10.1091/mbc.E24-05-0214 PMID: 38798545 Free PMC article. Updated. Preprint.
The multimodality cell segmentation challenge: toward universal solutions.
Ma J, Xie R, Ayyadhury S, Ge C, Gupta A, Gupta R, Gu S, Zhang Y, Lee G, Kim J, Lou W, Li H, Upschulte E, Dickscheid T, de Almeida JG, Wang Y, Han L, Yang X, Labagnara M, Gligorovski V, Scheder M, Rahi SJ, Kempster C, Pollitt A, Espinosa L, Mignot T, Middeke JM, Eckardt JN, Li W, Li Z, Cai X, Bai B, Greenwald NF, Van Valen D, Weisbart E, Cimini BA, Cheung T, Brück O, Bader GD, Wang B. Ma J, et al. Among authors: weisbart e. Nat Methods. 2024 Jun;21(6):1103-1113. doi: 10.1038/s41592-024-02233-6. Epub 2024 Mar 26. Nat Methods. 2024. PMID: 38532015 Free PMC article.
High-dimensional phenotyping to define the genetic basis of cellular morphology.
Tegtmeyer M, Arora J, Asgari S, Cimini BA, Nadig A, Peirent E, Liyanage D, Way GP, Weisbart E, Nathan A, Amariuta T, Eggan K, Haghighi M, McCarroll SA, O'Connor L, Carpenter AE, Singh S, Nehme R, Raychaudhuri S. Tegtmeyer M, et al. Among authors: weisbart e. Nat Commun. 2024 Jan 6;15(1):347. doi: 10.1038/s41467-023-44045-w. Nat Commun. 2024. PMID: 38184653 Free PMC article.
Reproducible image-based profiling with Pycytominer.
Serrano E, Chandrasekaran SN, Bunten D, Brewer KI, Tomkinson J, Kern R, Bornholdt M, Fleming S, Pei R, Arevalo J, Tsang H, Rubinetti V, Tromans-Coia C, Becker T, Weisbart E, Bunne C, Kalinin AA, Senft R, Taylor SJ, Jamali N, Adeboye A, Abbasi HS, Goodman A, Caicedo JC, Carpenter AE, Cimini BA, Singh S, Way GP. Serrano E, et al. Among authors: weisbart e. ArXiv [Preprint]. 2024 Jul 2:arXiv:2311.13417v2. ArXiv. 2024. PMID: 38045474 Free PMC article. Preprint.
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